| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57189 |
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| Symbol | PUT4.1 |
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| ID | 4838054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 551854 |
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| End bp | 553566 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389369 |
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| Product | Proline-specific permease (Proline transport protein) |
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| Protein accession | XP_001383382 |
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| Protein GI | 150864531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACTTG ATAAGAAAGA CCCTGGTTCG GTCATTGATG TGGAGAAGAT AGGCTCCGTC
GATAGACATT ATGTTTCTAC CGGATTCGAT GATTTCAACG ATAAACTCGA TCCTGAAAAG
TATGGTCAAA CAAAGAGAAA ATTATCTTCC AGACATGTCA GTTTAATGAT CATTGGGCAG
AGTATAGGGA CAGGGTTGTT CATCGGTCTT GCACTGCCGC TTATGACGTC GGGGTCGCTC
TCTTTGTTCA TAGGGTTCTT ATTCTGGGCC ATTCTCATGA TCTGGCCGTT GATGCAAGCT
GTTGGCGAAA TGTGCTCATA CTTGCCCATT AAGGGTAGTT TCTTGCACTA CTGCGCCAGA
TGGGTAGACC CAGCTTTGGG CTTTGCTTGT ACCTTAATCT ATTTGTACAC TTCGTTGATG
TTCATTTGTC TTGAAGCAGT TGCCGTGGCG TCAGTCATTG GATACTGGAC TGATATCAGC
AACGCAGTGT GGATAACAAT CACCATTGTG TCCTACTTCT TCTTCAACAT ATTTGGTGTC
AACTGGTACG GTGAAATCGA GTTCTTCTCA TCTATGCTTA AGGTATTGTT GATCGTAGGC
TTGATGTTTT TTTCCTTGAT TTCCATGTGT GGTGGAAACC CTAAGGGAGA CGCCTATGGT
TTCCAGCACT GGAAGGAAGG AGGACTTTTC AAGTCGTATC TCGTTCCTGG CTCAACTGGT
CAATTTTTGG GTTGGTGGAA TGTTCTCATC TACGCTGCTT TCTCCTGTGG TGGTCCAGAT
CTTTTGGGCT TGATTGCCGG TGAAGTTTCG TTGCCCAGAA AGAACATTGG TTTGGCTGCT
AAGAGATCTT ACATTCGTAT CTATCTTTTC TACTTCGGTG GGATCTTCTT CATGAACAGT
TTGTGTTCTT CCATCAACCC AGACTTGGTC AATGCCAGAG AAGCCGGTGC TGTAGGTGCT
GGTGGCTCTC CTTGGGTCAT TGGAATCAGA GCTGTTGGAG TTCATGGACT TGATTCCTTG
GTCAATGCCT GTATTATGGC CTCAGCCTGG TCCTGTGGAA ATGGGTTCTT CTACGGTGCC
ACCAGAACTG CTTACAGTGC CTCTTTGGCT GGTTACCTTC CTAGATTCTT TTCTAAGTGT
ACAAAGAACG GGGCTCCCAT CTACTGTGTC ATGTTTTGTT CTGCTGTGTC ATGTTTGGCC
TACATGAGTG TGTCTACTTC TTCTGCTACA GTGTTCAACT GGTTCATTAA CTTATCAACA
ACTGGTTTGT TGTGTACTTA TATCTGCATG TGGTGGTGCT ATTTCAAGTT CAGAAAGGCA
TTGCCTGCCC AGGGCATCGA CATCAAGAGC AGCTCCTACA TCTACTATCT TTCGCCAAAG
TTTGTCTACC CATACATGTC TTACTTTGGA CTTTTCATCA ACATTTTGGT GTTGTTCTTC
AACGGGTTCT GGATATTCTT CCCTGGCCAA TTCTCGGCTG CAAACTTGTT GACATCGTAC
TTTGCCCCAG TATTCTTTAT TGCATTATTC TTGTTCTGGA AGGTTTTCAA GAAGACCCAC
TTCAGAAGTG ACACGGAAGC TGATATCACC ACTGGTAAGG AAGAGATCGA CGAAGAGGAA
GAAATAGAAA AGGAATATTA CGCCAACCAT CCCCGCAAGG AGGGTATCAT TTTCAAGATC
TGGTACAAGA TCGCCGACTG GTGCTTCAAC TAG
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| Protein sequence | MSLDKKDPGS VIDVEKIGSV DRHYVSTGFD DFNDKLDPEK YGQTKRKLSS RHVSLMIIGQ
SIGTGLFIGL ASPLMTSGSL SLFIGFLFWA ILMIWPLMQA VGEMCSYLPI KGSFLHYCAR
WVDPALGFAC TLIYLYTSLM FICLEAVAVA SVIGYWTDIS NAVWITITIV SYFFFNIFGV
NWYGEIEFFS SMLKVLLIVG LMFFSLISMC GGNPKGDAYG FQHWKEGGLF KSYLVPGSTG
QFLGWWNVLI YAAFSCGGPD LLGLIAGEVS LPRKNIGLAA KRSYIRIYLF YFGGIFFMNS
LCSSINPDLV NAREAGAVGA GGSPWVIGIR AVGVHGLDSL VNACIMASAW SCGNGFFYGA
TRTAYSASLA GYLPRFFSKC TKNGAPIYCV MFCSAVSCLA YMSVSTSSAT VFNWFINLST
TGLLCTYICM WWCYFKFRKA LPAQGIDIKS SSYIYYLSPK FVYPYMSYFG LFINILVLFF
NGFWIFFPGQ FSAANLLTSY FAPVFFIALF LFWKVFKKTH FRSDTEADIT TGKEEIDEEE
EIEKEYYANH PRKEGIIFKI WYKIADWCFN
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