Gene PICST_57134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57134 
SymbolOYE3.2 
ID4837924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp968131 
End bp969435 
Gene Length1305 bp 
Protein Length434 aa 
Translation table12 
GC content44% 
IMG OID640389239 
ProductNADH:flavin oxidoreductase/12-oxophytodienoate reductase 
Protein accessionXP_001383472 
Protein GI150864590 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTT CTTCTGTTGG ACCAGACTAC GAAGTGCCCG TTGCCAAAAA CGTTGATTAC 
TACTCGCCAT TACCAGATGT TGCTTCAGGA ACATTCTTCA AAGAAAAGGA AGCTGACAAG
CCTCCTAAGA TTTTTCTGCC TTTGAAAATA AGGGGTTTGA CCTTGCCCAA CAGGATCGGG
GTTTCGCCAA TGTGCCAATA CTCAGCCGAT GAAAAGTTCC AAGCTACTCC TTTCCATTTA
ATTCACTATG GACTGATACT TCTCAGGGGT CCTGCGATCA CCATCATCGA AGCCAGTGCT
GTTTCTCCCG AAGGTCCGTT ATCTCCCCAC GATTTAGGAA TTTTCAATGA CGCTCAAGCC
GAAAAATTGA AACCTATTGT AGATTTCGCT CATGCCTACA AAAAATTGAT TGCTATCCAA
TTGGCCCATG GTGGTAGAAA GGCTAGTGGT CAGCCTTTGT TCAGCCATCT TGAACAAGTT
TCTGATGCTA GCGTAGGTGG TTTCCCAGAC AAGACCGTTG CTCCTTCTGC CATTCCCTTC
AGACCCTACG GTAACTTGCC CACTCCCAAT GAGATTACCA AAGAAGACAT CAAGAGAGTC
ATTAGAGAAT TCGGTGAAGC TGCAAAGAGA TCCATTGAAA TCAGTGGATT TGATGCCATC
GACATCCATG CTGCACATGG CTACTTGATT CATGAGTTCT ACAGTGCTTT CTCAAACAAA
AGAACTGACG AATATGGAGG AAGTTTTGAA AACAGAATTA GATTCCTTTT GGAAGTCATC
GACAGTGTAA GACTGAACAT TCCCGAGTCT GTCCCTGTGT TCTTGAGAAT ATCTGCTAGT
GATAACGTCG ATGATCCAGA CGCCTGGACT ATCGAGGACT CCATCAAATT AGCCAAAATA
GTAGCTGACA AGGGTATTGA TTTGATTGAC GTTTCTTCCG GTGGAAACAT CTACAAGCAG
CAATCGAGAT CCAAGCTTCA AACCGCCGAC AAGCCTATCC ACGAACCATT TGCCAGAGCA
ATCAAGGAAG CCGTCGGTGA CAAGTTGCTT GTATCCTGTG TTGCCAATCT TGAACGCGAC
CCAAAGCAAA CAGCAGAATT AATCGAAGAG GGATCCTTTG ATTTGGCTTT GATGGGTAAA
GGATTCATGA AGAACCCAGG CTTAGTATGG CATTTTGCTG ATGTCTTGGG TGTTAAAACT
CATCAAATCC AGCAATACAA CTGGGTCTTC AATCCAAAGA GAGAAGGAAT CGCAGAATTG
ATTGCAAGAA CTGAAAAGCT TCTGGCTCAA GAGTCTGCTC AATAA
 
Protein sequence
MTSSSVGPDY EVPVAKNVDY YSPLPDVASG TFFKEKEADK PPKIFSPLKI RGLTLPNRIG 
VSPMCQYSAD EKFQATPFHL IHYGSILLRG PAITIIEASA VSPEGPLSPH DLGIFNDAQA
EKLKPIVDFA HAYKKLIAIQ LAHGGRKASG QPLFSHLEQV SDASVGGFPD KTVAPSAIPF
RPYGNLPTPN EITKEDIKRV IREFGEAAKR SIEISGFDAI DIHAAHGYLI HEFYSAFSNK
RTDEYGGSFE NRIRFLLEVI DSVRSNIPES VPVFLRISAS DNVDDPDAWT IEDSIKLAKI
VADKGIDLID VSSGGNIYKQ QSRSKLQTAD KPIHEPFARA IKEAVGDKLL VSCVANLERD
PKQTAELIEE GSFDLALMGK GFMKNPGLVW HFADVLGVKT HQIQQYNWVF NPKREGIAEL
IARTEKLSAQ ESAQ