Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57121 |
Symbol | |
ID | 4838052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 546043 |
End bp | 546798 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389367 |
Product | predicted protein |
Protein accession | XP_001383739 |
Protein GI | 150864768 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.376231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAT CCACAGAAAT CACTCTTGGG GTTCTTGCGC TCCAGGGAGC CTTCAGGGAA CACATTGAAT ACTTCCAGAA GGTCATAGAG TCGCATCCTC AGGAGTACAG CAAGTTTACC TTCACGTTCA TCGAGGTCAA GACCGAAGAC CAGCTCCGGA GATGTGATTC GTTGGTCATT CCAGGAGGCG AGAGCACCTC CATCTCTCTC ATTGCCGAGA GGACCAACTT GTTGCAGCCT TTGATGGACT ACGTCAAGCT GGAAAATCCT ATCTGGGGAA CCTGTGCTGG TTTGATCTTT TTGTCGAAGC AGTTGAAGAA TGGCCGTGTA GGACAAAAGT TGTTGGGAGG CCTCAATGTA GAAGTCACTA GAAACGCCTT TGGCAGACAG CTAGACTCTT TTGAGTCTCC ATTAGACTTC AGCCTGTTTA TCCCAGATTG CCATGCATTT CCGACTGTAT TTATACGTGC ACCTGTAATC ACAGAATTGT TGCACGATGG ACCTACAGAG TCTAAGTCTG AATCAGACTC AATATTCTAT TCACAAAATA ATTACAATAA CAAGGCACCT ATAGAGGTAT TGCACAGCTT GAAGAACCAT GGCAAAATCG ACCACGAGCT TATTGTAGCT GTCAGACAAG GGCACATCTT GGGAACCTCG TTCCATCCGG AGTTGGCTAC CGATGATTAT CGTTTCCATA AATGGTACAT TGATGAGTTT GTAGTGAAAT CAAAAAATAA GAGCACAGAT ATATAA
|
Protein sequence | MTTSTEITLG VLALQGAFRE HIEYFQKVIE SHPQEYSKFT FTFIEVKTED QLRRCDSLVI PGGESTSISL IAERTNLLQP LMDYVKSENP IWGTCAGLIF LSKQLKNGRV GQKLLGGLNV EVTRNAFGRQ LDSFESPLDF SSFIPDCHAF PTVFIRAPVI TELLHDGPTE SKSESDSIFY SQNNYNNKAP IEVLHSLKNH GKIDHELIVA VRQGHILGTS FHPELATDDY RFHKWYIDEF VVKSKNKSTD I
|
| |