Gene PICST_57121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57121 
Symbol 
ID4838052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp546043 
End bp546798 
Gene Length756 bp 
Protein Length251 aa 
Translation table12 
GC content45% 
IMG OID640389367 
Productpredicted protein 
Protein accessionXP_001383739 
Protein GI150864768 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.376231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAT CCACAGAAAT CACTCTTGGG GTTCTTGCGC TCCAGGGAGC CTTCAGGGAA 
CACATTGAAT ACTTCCAGAA GGTCATAGAG TCGCATCCTC AGGAGTACAG CAAGTTTACC
TTCACGTTCA TCGAGGTCAA GACCGAAGAC CAGCTCCGGA GATGTGATTC GTTGGTCATT
CCAGGAGGCG AGAGCACCTC CATCTCTCTC ATTGCCGAGA GGACCAACTT GTTGCAGCCT
TTGATGGACT ACGTCAAGCT GGAAAATCCT ATCTGGGGAA CCTGTGCTGG TTTGATCTTT
TTGTCGAAGC AGTTGAAGAA TGGCCGTGTA GGACAAAAGT TGTTGGGAGG CCTCAATGTA
GAAGTCACTA GAAACGCCTT TGGCAGACAG CTAGACTCTT TTGAGTCTCC ATTAGACTTC
AGCCTGTTTA TCCCAGATTG CCATGCATTT CCGACTGTAT TTATACGTGC ACCTGTAATC
ACAGAATTGT TGCACGATGG ACCTACAGAG TCTAAGTCTG AATCAGACTC AATATTCTAT
TCACAAAATA ATTACAATAA CAAGGCACCT ATAGAGGTAT TGCACAGCTT GAAGAACCAT
GGCAAAATCG ACCACGAGCT TATTGTAGCT GTCAGACAAG GGCACATCTT GGGAACCTCG
TTCCATCCGG AGTTGGCTAC CGATGATTAT CGTTTCCATA AATGGTACAT TGATGAGTTT
GTAGTGAAAT CAAAAAATAA GAGCACAGAT ATATAA
 
Protein sequence
MTTSTEITLG VLALQGAFRE HIEYFQKVIE SHPQEYSKFT FTFIEVKTED QLRRCDSLVI 
PGGESTSISL IAERTNLLQP LMDYVKSENP IWGTCAGLIF LSKQLKNGRV GQKLLGGLNV
EVTRNAFGRQ LDSFESPLDF SSFIPDCHAF PTVFIRAPVI TELLHDGPTE SKSESDSIFY
SQNNYNNKAP IEVLHSLKNH GKIDHELIVA VRQGHILGTS FHPELATDDY RFHKWYIDEF
VVKSKNKSTD I