Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57097 |
Symbol | |
ID | 4837702 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1673148 |
End bp | 1673978 |
Gene Length | 831 bp |
Protein Length | 260 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389017 |
Product | predicted protein |
Protein accession | XP_001383608 |
Protein GI | 150864674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0827134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0493336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GATACAGGCT GCACGTTTTG CTCGGTTCCT GAGTTGCCAT CTGATAAGCA GATCGATTTC CAAGCTAACT TGAATGGAAC CAAGATTTTA CCCTGGAAAC ATGTTTTGAT ATTGACCCAT GGATTTAGTG ATTTTTCCAC TATGCCCTCA AAGATCGAAC TTGTGCCTGG TTCATTGAGC TCAGAAATAA ACCTGTTGAA GAAACACATA ATCAGCCCTC ACCATCCCAT CTTGGTGCTG AACATCTTGT TGAAGTCTCA CAAGAAAGTT CTACAAGAAT ATGGAATTGA TGCAGAAAAA GACCCTCGGA AACAGTTGGT ATACTTGTAC CCTGACAATA AGGTGATCAA ATTTGACTTG AATCACACTC AAGATTTTGT ACGAAAGTAT CTTGTTCCTC AAGCCAGCGA GCTAGCACCA GTGTACAATC CTTTCAAAGT TGCGGCCGAA GAATCATCTA GTAAAAAGAC GGAAGAGCCA GTAGCCGGCC ATAACTTCGA CGAGTTCACA GTTGATAAGA ACTTGGTGCT TATATGTGGC CACGCAAAAA GAGACATTCG ATGTGGACAG TTGGCTCCAT TGCTAGAAAA CGAATTTGAG CAGGTTCTAC ACCGTGAGAA TTTGAGCAAA ATAACAGACT TGGGCCTCAT CTCTCATATA GGTGGACATG CCTACGCCGG CAACGTGATC TACTTCCCTA AAGAAAACGA CAAGGACATA ATCTGGTATG GAAGAGTGTT TCCTGAAACG GTCCAGGGCA TTGTGAGTGA GACTATTAAG AAGGGCACAA TCATTGCTGA CTTGTACAGA GGAGTTCTTC CCCAAAACTA G
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Protein sequence | DTGCTFCSVP ELPSDKQIDF QANLNGTKIL PWKHVLILTH GFSDFSTMPS KIELVPGSLS SEINSLKKHI ISPHHPILVS NILLKSHKKL VYLYPDNKVI KFDLNHTQDF VRKYLVPQAS ELAPVYNPFK VAAEESSSKK TEEPVAGHNF DEFTVDKNLV LICGHAKRDI RCGQLAPLLE NEFEQVLHRE NLSKITDLGL ISHIGGHAYA GNVIYFPKEN DKDIIWYGRV FPETVQGIVS ETIKKGTIIA DLYRGVLPQN
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