Gene PICST_57097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57097 
Symbol 
ID4837702 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1673148 
End bp1673978 
Gene Length831 bp 
Protein Length260 aa 
Translation table12 
GC content43% 
IMG OID640389017 
Productpredicted protein 
Protein accessionXP_001383608 
Protein GI150864674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0827134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0493336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GATACAGGCT GCACGTTTTG CTCGGTTCCT GAGTTGCCAT CTGATAAGCA GATCGATTTC 
CAAGCTAACT TGAATGGAAC CAAGATTTTA CCCTGGAAAC ATGTTTTGAT ATTGACCCAT
GGATTTAGTG ATTTTTCCAC TATGCCCTCA AAGATCGAAC TTGTGCCTGG TTCATTGAGC
TCAGAAATAA ACCTGTTGAA GAAACACATA ATCAGCCCTC ACCATCCCAT CTTGGTGCTG
AACATCTTGT TGAAGTCTCA CAAGAAAGTT CTACAAGAAT ATGGAATTGA TGCAGAAAAA
GACCCTCGGA AACAGTTGGT ATACTTGTAC CCTGACAATA AGGTGATCAA ATTTGACTTG
AATCACACTC AAGATTTTGT ACGAAAGTAT CTTGTTCCTC AAGCCAGCGA GCTAGCACCA
GTGTACAATC CTTTCAAAGT TGCGGCCGAA GAATCATCTA GTAAAAAGAC GGAAGAGCCA
GTAGCCGGCC ATAACTTCGA CGAGTTCACA GTTGATAAGA ACTTGGTGCT TATATGTGGC
CACGCAAAAA GAGACATTCG ATGTGGACAG TTGGCTCCAT TGCTAGAAAA CGAATTTGAG
CAGGTTCTAC ACCGTGAGAA TTTGAGCAAA ATAACAGACT TGGGCCTCAT CTCTCATATA
GGTGGACATG CCTACGCCGG CAACGTGATC TACTTCCCTA AAGAAAACGA CAAGGACATA
ATCTGGTATG GAAGAGTGTT TCCTGAAACG GTCCAGGGCA TTGTGAGTGA GACTATTAAG
AAGGGCACAA TCATTGCTGA CTTGTACAGA GGAGTTCTTC CCCAAAACTA G
 
Protein sequence
DTGCTFCSVP ELPSDKQIDF QANLNGTKIL PWKHVLILTH GFSDFSTMPS KIELVPGSLS 
SEINSLKKHI ISPHHPILVS NILLKSHKKL VYLYPDNKVI KFDLNHTQDF VRKYLVPQAS
ELAPVYNPFK VAAEESSSKK TEEPVAGHNF DEFTVDKNLV LICGHAKRDI RCGQLAPLLE
NEFEQVLHRE NLSKITDLGL ISHIGGHAYA GNVIYFPKEN DKDIIWYGRV FPETVQGIVS
ETIKKGTIIA DLYRGVLPQN