| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57025 |
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| Symbol | SCW4.2 |
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| ID | 4838023 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 511191 |
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| End bp | 512180 |
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| Gene Length | 990 bp |
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| Protein Length | 303 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640389338 |
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| Product | cell wall glucanase Probable family 17 glucosidase SCW4 precursor (Soluble cell wall protein 4) |
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| Protein accession | XP_001383372 |
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| Protein GI | 150864524 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.277446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.953702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TCCGGGAGCG GTAGTTCTGT CTCCAGTGGA TCTTCTTCTG TTGTCGGCGC AGCTTCTATC
AGCGGGACTC CCACTTCCCC AAGTTCCATA GTGGCCCCCG CTAACCAAGC AGGTCTTCCT
TTGTCAGTAG TCGGATCCTT CTCTGTTTCG TTGCCCACAG GAACTGGAAC AGTCAACGGA
GGTAGTATTA GTGCTGCCGA TGGTTCCTTG GGAATCACAT ACTCTCCATA CACAAAGTCA
GATGCTTGCA AGTCAGCCCT GGAAGTCGCT TCAGACATTG CTAAGTTATC CAACTTCAAA
ATCATCAGAT TATATTCCAC TGACTGTTCT GGAATTGAGA ACGTCTTGGC TGCTATCAAC
AGCAACCAAC AGGTTTTCTT AGGAATCTGG GGTATTGACT CCGGTTCTGT TACCAGCGGA
TTGCAAGACA TTACCACAGC TGTTGAGGGC TCTTCTCGTG GATGGGGTGC TGTTCATACC
ATTGCTATTG GTAACGAAAG AGTCAACGAT GGAGCAGCTA CTCCTTCCGA TATCCAAAGT
GCTATCAACA CTGCCAAATC ATGGCTCAAA AGCAATGGTT CCGGATACAC AGGTCCAATT
GTTTCCGTGG ACACATTGGT AGCTGTTGTC AGCAACCCAT CATTGTGTAG CTATTCTGAC
TACATTGCTG TCAACTCTCA CCCATACTGG GACGGAGGAG TTCAACCAAG CAACTCTGGA
CCTTGGTTGG TAGACCAAAT CAACAACTTG AAGAGTGTTT GCGGTTCTAG CAAACCCATC
ATGATCACTG AAACAGGGTG GCCCACCAAA GGAGATACAA ATGGTGTTTG CGTACCTTCA
GTGGCTAACC AAGAAGCAGC TTTACAGAGT ATTGTGCTGA CTTTGGGAAA CCAGGTGATT
GCCTTCACAA TGTACAATGA CTACTGGAAA TCGCCAGGGT CTATGGGTGT TGAGCAATAC
TGGGGTATTT TCGGTGACCC CAGTGAATAG
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| Protein sequence | SGSGSSVSSG SSSVVGAASI SGTPTSPRTG TVNGGSISAA DGSLGITYSP YTKSDACKSA
SEVASDIAKL SNFKIIRLYS TDCSGIENVL AAINSNQQVF LGIWGIDSGS VTSGLQDITT
AVEGSSRGWG AVHTIAIGNE RVNDGAATPS DIQSAINTAK SWLKSNGSGY TGPIVSVDTL
VAVVSNPSLC SYSDYIAVNS HPYWDGGVQP SNSGPWLVDQ INNLKSVCGS SKPIMITETG
WPTKGDTNGV CVPSVANQEA ALQSIVSTLG NQVIAFTMYN DYWKSPGSMG VEQYWGIFGD
PSE
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