Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56833 |
Symbol | |
ID | 4837915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 558580 |
End bp | 560010 |
Gene Length | 1431 bp |
Protein Length | 477 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389230 |
Product | predicted protein |
Protein accession | XP_001383384 |
Protein GI | 150864532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.637444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCTT CAGCTATAAA GGAAGCTCTC GCTATACTAC CATCAGATGA AAAGATCACG ATGTTTGTCC AGATCTTTCT AAATATCTGT GAAACCAATT ATTTCTACGC TATTCATCTG GAAGTGTATG GAAAATTGGT CGATCTCTAC GAAGCAAGAC GGGTCGGAGA CTTGGAATAC TTCTATCGAG AATGGCCCTT TTTGGTAATC GTTTTGTCAA TGCTTTCGGT GTCGGCTGGT TTTGATTATA TTGGATCCAA ATTGCCCATA CCTCAAGAAG AATACAGTGT TAATCCCGGA TACAATTACT ACTTCGCTTC AATGCCCTTT GTAGGTTTCT TATTAGACAG TAAAGCTATC GAAGGTGCAC AAGCTCTTTT GATGTTGGGA GTGTTTTTGA CTACAAACAA GAATGAACAA TTTGGATTGG CTGATGGAGG TTACTCATTC ATGGCTTTGG CTTTAGAGAT AGCTATTTCC AATAAACTTT ATACCAAGGA CACATTTAGT CGTCTACCTG ATTACGAAGC TGAAGCCATG AAGCGCCTTT GGTGGTCATG TTACACTTTA GAGAGAAGAC ATGGGTTCAA TCTTGGAAAA CCAGAGTTAT TCCGAATCGA AGACATCACC GTTGGATTAC CAGAGTACAG TTTTGAACTA AGGAATAACA GTGGCTCGTC AAACCATCTC AATCAAAGAG TAGTGATTCA GTTAACAATG GTTTTCATCA AGCTAACTAA ACTAGAATAC ACTAAAACCA CCTCAGCTAA TAGAGTTGAA ATCGATACAA AGATGATCAG AGCACTAGCT GACGATGTGG AAGAATGCAG AGCAAGCTTC CCAGAATACG CTTTGATAGA AAACCTCGAT CCTTCAGCGG ACTTATATAG AGGTAACGTC CATCTCCATT TGAACTACTA CCTTGCAAAG ATCTACATCG GAAAGCCGTT TTTGCTTTAC AAAGTTGAGA ACCAACTGAA AATCCAAGAA AATAGCTACG AGACTGCTAT TGTCGATCAC TTGTCTTCTA TTTGCATCGA TGCTGCTTTC TGCTCTATTG AGCTACTCAG CGTTCTTGAA AAAAACTCTA AATTGGGGCA ATTTTCCTTT ACCGACCTCA ACTTTTGTAA TATTTCACTT TTTGTCATAT TGGTGTATTT GAACATTGAC AAATCTGACA ATACACTTCT TTTCCTTCTG AAAGGGTTAG GTATTCTTCG AACCCTTTCT CGTGGTTCAG CTACAGCAAA GCTGTCATTG AACAAACTTC AAAAATTTAT TGACTTAGTC TCTGTAGTTG ACACAAAGAC TACAGATTCT AGCCAAGCAC CGTATGCTCT TGTAGATCTT GAAGCCGGAG GAATGGGCTT TCCTGAACTT CCTTCAGACA TTGATGGTTT TCTCCAGTTG GAGAATTTTG GGTTCATGGA C
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Protein sequence | MLSSAIKEAL AILPSDEKIT MFVQIFLNIC ETNYFYAIHS EVYGKLVDLY EARRVGDLEY FYREWPFLVI VLSMLSVSAG FDYIGSKLPI PQEEYSVNPG YNYYFASMPF VGFLLDSKAI EGAQALLMLG VFLTTNKNEQ FGLADGGYSF MALALEIAIS NKLYTKDTFS RLPDYEAEAM KRLWWSCYTL ERRHGFNLGK PELFRIEDIT VGLPEYSFEL RNNSGSSNHL NQRVVIQLTM VFIKLTKLEY TKTTSANRVE IDTKMIRALA DDVEECRASF PEYALIENLD PSADLYRGNV HLHLNYYLAK IYIGKPFLLY KVENQSKIQE NSYETAIVDH LSSICIDAAF CSIELLSVLE KNSKLGQFSF TDLNFCNISL FVILVYLNID KSDNTLLFLS KGLGILRTLS RGSATAKSSL NKLQKFIDLV SVVDTKTTDS SQAPYALVDL EAGGMGFPEL PSDIDGFLQL ENFGFMD
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