| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56703 |
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| Symbol | CGA1 |
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| ID | 4837769 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1084117 |
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| End bp | 1086999 |
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| Gene Length | 2883 bp |
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| Protein Length | 951 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389084 |
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| Product | Glucoamylase 1 precursor (Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) |
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| Protein accession | XP_001383835 |
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| Protein GI | 150864848 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCA GAGACTTAAT AAAATCTTCG GTTGTCGCTC TTGGAGTGAC AAACTCTGTG
CTTGGTGCTG CAATTTCTTC TTCTGAGTCA GAGGTCGCTT CGAGCACCTC CTCAAGTGGA
GACTCTCGAG CAACAGTTCC CAATGACTTG ACTTTAGGTG TTAAGCAGGT TCCTAACATC
CTCAATGATA CTGCTGTTGA TGCTAACCAG GAAGCAAAGG GTTACACTTT GGTCAATGTT
ACCTCCACAC CAAGAGGATT GACCGGTATT CTCGAGTTAA AGGAGGCTAC TAATATCTAT
GGTTATGACT TTGATCATTT GAACTTGACG GTGACTTACC AGTCTGACAA GCGTTTGAAT
GTTCATATTG AACCAACAAA CTTAACCGAT GTCTACATTT TGCCTGAAGA CTTGGTTGTG
AAGCCAACTA TCGAAGGAGA TGTCAATTCA TTCAATTTCG AAGACTCTGA CTTAGTCTTC
CAGTACCACT CGGATGACTT CTCGTTTGAA GTGGTTAGAG CTTCTACCGG AGAGGTTTTG
TTTTCCACTG ATGGTAATCC ATTGGTATTT TCCAACCAAT TCATTCAATT CAACACCACT
TTGCCAAAGG GGTATGCAAT TTCTGGATTA GGCGAGTCCA TCCATGGTTC TTTGAGTTTG
CCAGGAACTG TAAAGACTTT GTTCGCTAAC GATGTTGGTG ACCCTATCGA CGGTAACATT
TACGGTGTTC ATCCTGTTTA CTATGACCAA AGATACAATT CAAATACCAC CCATGGTGTC
TACTGGAGAA CATCTGCTAT CCAAGAAGTC ATTTTTGAAG AACAATCTTT GACCTGGAGA
GCACTTTCTG GAGTTATTGA CTTATACTTC TTCAGCGGTC CTGACCCTAA GGATGTTATT
CAACAATATG TTTCAGAAAT AGGATTGCCA GCTTTCCAAC CATACTGGGC TCTTGGATAT
CACCAGTGTA GATGGGGTTA TCGTGAAATC GAGGACTTGG AAGATGTAGT AACCAACTTC
AAGAATTTCA ATATTCCATT GGAAACCATC TGGTCTGATA TCGATTACAT GGACTCATAC
AAGGATTTCA CAAATGACCC ACATAGATAC CCAACTGACA AGTACCAGGA CTTCTTGGAC
AAGCTACACA AGAACAACCA ACACTATGTT CCAATCTTCG ATGCAGCAAT TTACGTTCCA
AATCCAAATA ATGAAACTGA CAATGACTAT ACCCCCTTCC ATGCCGGTAA CGAATCTGAC
ATCTTCCTTA AGAACCCAGA TGGCTCTTTA TACATTGGTG CTGTTTGGCC CGGTTACACC
GCTTTCCCAG ATTTCCTTGC TAACAATACA CAAGACTGGT GGAACGAGAT GTTTAAAGAA
TGGCACGACA GAATCCCATT CGATGGTATT TGGTCCGATA TGAACGAAGT CAGTTCTTTC
TGTGTTGGTT CGTGTGGTAC TGGCAGATAC TTTGAAAACC CAGCAGATCC ACCATTCTTG
GTTGGAGGCG AAGTTACTCA ATATCCATCA GGTTTCAACG TTTCGAACTC AACTGAATGG
AAGTCTATTT CCAGTTCAAT TGCTGCTACA GCCACTACTT CTAAGCCCAG TCCATCAAGC
TCTTCTGCTT CAATCGACTC CATGAACACA TTGTTGCCAG GTAAGGGAAA CATCAACTAC
CCACCTTACG CTATCAACCA CGCCCAAGGT GATCATGATC TTGCAACTCA TGCAGTTTCT
CCAAATGCAA CTCATGCAGA TGGCACTGTT GAATATGATA TCCATAATCT CTACGGATTC
TTACAAGAAA AGGCTATCCA CGCTGCTTTG TTGGAAATCT TCCCAAACAA GAGGCCATTT
ATTATTGCCC GTTCTACCTT CTCCGGTGCT GGCCATTACA TGGGTCACTG GGGTGGTGAC
AACAATGCTG ACTATGACAT GATGTACTTC TCTATTCCTC AGGCATTCAG CATGGGTCTT
TCTGGTATTC CTTTCTTTGG AGTTGATGTT TGTGGTTTCA ATGGAAACTC GGATGCTGAA
TTGTGCTCGA GATGGATGCA ATTGGGTTCG TTCTTCCCAT TCTACAGAAA CCACAATGTT
TTGGGAGCCA TTTCTCAAGA ACCATACGTT TGGTCTTCTG TTGCTGATGC CACGAGAACC
TCAATGGCTA TCAGATACTT GTTGTTGCCA TACTACTATA CCTTGTTGCA CGAATCACAT
GTTACTGGTT TGCCAATCTT GAGATCCTTG TCGTGGCAAT TCCCATACGA GAAGAAGTAC
AACGGTATCG ACAACCAATT GTTTGTTGGT GATGCCTTGA TTGTTACTCC AGTTTTAGAA
CCAGGTGTCA ACAAGACCAA GGGTGTTTTC CCAGGTGCTG GTGTCTCAGA AGTCTACTAC
GATTGGTACA CTCACGAAAA GCAAGACTTC AGAAATGGAA AGAATGAAAC CTTGGCTGCA
CCATTGGGTC ACATCCCATT GCATGTCAGA GGTGGTCACA TTTTGCCACT TCAAGAACCA
GGCTACACTG TTGCTGAATC CAGAGAGAAT CCATTTGCAT TGCTTGTAGC TTTGGACAAT
GAAGGTAATG CTTCAGGAAA GCTCTACCTT GACGATGGGG AATCTTTGGA AATTGAAGAA
TCTTTGTATG TTGACTTTGT TGCTCACAGC AAGCTGTTGA CAGCATCGAG TTTTGGAGAA
TACAATGTTT CGCAGCCATT GGCCAATATT ACCATCTTGG GTGTGGAGAA GAAGCCTAAG
CAGGTCGAAT TCGAGGATTC AAAGGTCAAG TTCAGTTACG AAAATTCAAC TATTTTCGTC
ACAGGTTTGG AAAAGTATAC CAAAGAAGGT GCTTTCGCTA AGCAATTCAC CCTTACTTGG
TAA
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| Protein sequence | MIFRDLIKSS VVALGVTNSV LEVASSTSSS GDSRATVPND LTLGVKQVPN ILNDTAVDAN
QEAKGYTLVN VTSTPRGLTG ILELKEATNI YGYDFDHLNL TVTYQSDKRL NVHIEPTNLT
DVYILPEDLV VKPTIEGDVN SFNFEDSDLV FQYHSDDFSF EVVRASTGEV LFSTDGNPLV
FSNQFIQFNT TLPKGYAISG LGESIHGSLS LPGTVKTLFA NDVGDPIDGN IYGVHPVYYD
QRYNSNTTHG VYWRTSAIQE VIFEEQSLTW RALSGVIDLY FFSGPDPKDV IQQYVSEIGL
PAFQPYWALG YHQCRWGYRE IEDLEDVVTN FKNFNIPLET IWSDIDYMDS YKDFTNDPHR
YPTDKYQDFL DKLHKNNQHY VPIFDAAIYV PNPNNETDND YTPFHAGNES DIFLKNPDGS
LYIGAVWPGY TAFPDFLANN TQDWWNEMFK EWHDRIPFDG IWSDMNEVSS FCVGSCGTGR
YFENPADPPF LVGGEVTQYP SGFNVSNSTE WKSISSSIAA TATTSKPSPS SSSASIDSMN
TLLPGKGNIN YPPYAINHAQ GDHDLATHAV SPNATHADGT VEYDIHNLYG FLQEKAIHAA
LLEIFPNKRP FIIARSTFSG AGHYMGHWGG DNNADYDMMY FSIPQAFSMG LSGIPFFGVD
VCGFNGNSDA ELCSRWMQLG SFFPFYRNHN VLGAISQEPY VWSSVADATR TSMAIRYLLL
PYYYTLLHES HVTGLPILRS LSWQFPYEKK YNGIDNQLFV GDALIVTPVL EPGVNKTKGV
FPGAGVSEVY YDWYTHEKQD FRNGKNETLA APLGHIPLHV RGGHILPLQE PGYTVAESRE
NPFALLVALD NEGNASGKLY LDDGESLEIE ESLYVDFVAH SKSLTASSFG EYNVSQPLAN
ITILGVEKKP KQVEFEDSKV KFSYENSTIF VTGLEKYTKE GAFAKQFTLT W
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