Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_44319 |
Symbol | |
ID | 4838170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 43668 |
End bp | 44543 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389485 |
Product | predicted protein |
Protein accession | XP_001383283 |
Protein GI | 126133517 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4088] Predicted nucleotide kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.453921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTGA TAACTTTCAC AGGTTTGCCG TCTTCTGGTA AAACTACTTG GGCAAAGGAG TTGCAGCGAC AACTTCAGAA GAAAATCGAA ACTGCAAAGG AATCAAATAC ACCTGGCCAT AATTACAATA TCATATATCA TTCAGATGAG ACACTAGGAA TTTCTCACGA TGTGTATAGA GATTCGAATC TCGAGAAGCA CGCCAGAGGG AACCAGATGT CTGCTGTGAA AAGAGATCTT TCTCGGTCGA ATTTCGTCAT ATTGGACTCT CTTGCATATA TCAAAGGATT CAGATACCAG CTCTTTTGTG AAGCCAAAGG AGTAGTAACC CCACATTGTG TGATACAAGT GATTAACCCA ATTGAAAAAT GTATAGAATG GAACGAGTCA GAAAGCAAGG AAAACAAATG GGATCAAGAT CTCGTCCATC AACTCCTAAT GAGATATGAA GAACCAAATG GAGATTCAAG GTGGGACTCT CCGTTATTCA CCATTTTGTC AGCAGATGAA AATGAAAAGC TTCCCATAGA TGAAATTTGG GATTCATTGG TTTTGAAAAG ACCTCCACCT CCCAACGCTG CTACTCTAGT CAAACCTACC TCGGGAAACA ACTTTTTGCA AGAGTTGGAT AGACAAACAC AAGAAGTCAT CAGTAAGATT CTCCAGCATC AACAAATCAC AACTGTCGGA GGTGAAGTTC TTGTAAACAA AGACCAACAG TTGGTGGTTG AGTTGCCACC CACTCCTGTG AGTATTGCCC AAATGCAACG TATCAGAAGA ACATACATCA GTCTCAATAG AATGAGATCT GTGGACATCG ATAGAATAAC GCCACTATTT GTCGAATATG TAAATAGAAG TCTCAATAGC GATTAA
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Protein sequence | MPLITFTGLP SSGKTTWAKE LQRQLQKKIE TAKESNTPGH NYNIIYHSDE TLGISHDVYR DSNLEKHARG NQMSAVKRDL SRSNFVILDS LAYIKGFRYQ LFCEAKGVVT PHCVIQVINP IEKCIEWNES ESKENKWDQD LVHQLLMRYE EPNGDSRWDS PLFTILSADE NEKLPIDEIW DSLVLKRPPP PNAATLVKPT SGNNFLQELD RQTQEVISKI LQHQQITTVG GEVLVNKDQQ LVVELPPTPV SIAQMQRIRR TYISLNRMRS VDIDRITPLF VEYVNRSLNS D
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