Gene PICST_44319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44319 
Symbol 
ID4838170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp43668 
End bp44543 
Gene Length876 bp 
Protein Length291 aa 
Translation table12 
GC content40% 
IMG OID640389485 
Productpredicted protein 
Protein accessionXP_001383283 
Protein GI126133517 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4088] Predicted nucleotide kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.453921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGA TAACTTTCAC AGGTTTGCCG TCTTCTGGTA AAACTACTTG GGCAAAGGAG 
TTGCAGCGAC AACTTCAGAA GAAAATCGAA ACTGCAAAGG AATCAAATAC ACCTGGCCAT
AATTACAATA TCATATATCA TTCAGATGAG ACACTAGGAA TTTCTCACGA TGTGTATAGA
GATTCGAATC TCGAGAAGCA CGCCAGAGGG AACCAGATGT CTGCTGTGAA AAGAGATCTT
TCTCGGTCGA ATTTCGTCAT ATTGGACTCT CTTGCATATA TCAAAGGATT CAGATACCAG
CTCTTTTGTG AAGCCAAAGG AGTAGTAACC CCACATTGTG TGATACAAGT GATTAACCCA
ATTGAAAAAT GTATAGAATG GAACGAGTCA GAAAGCAAGG AAAACAAATG GGATCAAGAT
CTCGTCCATC AACTCCTAAT GAGATATGAA GAACCAAATG GAGATTCAAG GTGGGACTCT
CCGTTATTCA CCATTTTGTC AGCAGATGAA AATGAAAAGC TTCCCATAGA TGAAATTTGG
GATTCATTGG TTTTGAAAAG ACCTCCACCT CCCAACGCTG CTACTCTAGT CAAACCTACC
TCGGGAAACA ACTTTTTGCA AGAGTTGGAT AGACAAACAC AAGAAGTCAT CAGTAAGATT
CTCCAGCATC AACAAATCAC AACTGTCGGA GGTGAAGTTC TTGTAAACAA AGACCAACAG
TTGGTGGTTG AGTTGCCACC CACTCCTGTG AGTATTGCCC AAATGCAACG TATCAGAAGA
ACATACATCA GTCTCAATAG AATGAGATCT GTGGACATCG ATAGAATAAC GCCACTATTT
GTCGAATATG TAAATAGAAG TCTCAATAGC GATTAA
 
Protein sequence
MPLITFTGLP SSGKTTWAKE LQRQLQKKIE TAKESNTPGH NYNIIYHSDE TLGISHDVYR 
DSNLEKHARG NQMSAVKRDL SRSNFVILDS LAYIKGFRYQ LFCEAKGVVT PHCVIQVINP
IEKCIEWNES ESKENKWDQD LVHQLLMRYE EPNGDSRWDS PLFTILSADE NEKLPIDEIW
DSLVLKRPPP PNAATLVKPT SGNNFLQELD RQTQEVISKI LQHQQITTVG GEVLVNKDQQ
LVVELPPTPV SIAQMQRIRR TYISLNRMRS VDIDRITPLF VEYVNRSLNS D