| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_44298 |
|---|
| Symbol | RMS1 |
|---|
| ID | 4837946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 344432 |
|---|
| End bp | 346036 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640389261 |
|---|
| Product | putative transcription regulator |
|---|
| Protein accession | XP_001383347 |
|---|
| Protein GI | 150864509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAT TCGATGAGGA TTCCCAAAAG TTCACAACTT GGTTGGAATC GTCCGGTGTA
ACGATTTCTC CTAAGATCGC CATAGTAGAT TTGCGAGACC AACACCAGGG AAGAGCAGTA
GTCGCTGTTG AAGATATTGA TGCTGACGAG GTGTTGTATT CTATCCCAAG AAGCTCACTT
ATAAATGTAA CTAACTGTTC TTTAGTGGAT GACCATCCAC ATCTCAAGGA AAAGTTGCAA
AAGTTGGGCC ACTGGGAAGG TTTGATCACT GTACTCCTTT ACGAATTGAA AGCGAAAAAG
GAAAACAGCA AATGGCTTCC GTACTTCAAT GTCTTGCCGA TTAATGACAA GGAAAACTAC
CAATTGAACC AGTTGGTTCA TTGGTCAGAC GAAGAATTGA AGAGCTTGGA ACCTTCTCTA
GTTCTTGAAA GAGTAGGAAA GGATGACTCC TTACAAATGT TCAATAAATT GTATCCCAGG
ATTATAATTG AAGAGTTGGG TTTGAACGAG TTGGAAGGAA TTACGACAGA AGACTTGTAC
AATGTAGCCA GCTTAATTAT GTCGTACTCC TTCGATGTTC AGCTTCCTAA AGAAAATGTA
GAGGAAGAAG ATGAAAGTCA AGACGAAGAG GGAGATGAAG AAGAAGACTT GGAAGTAGAT
GACGATGACG TACTTGAAGG AAATGAAGAC AGCGAAGAGC AGGAAGAAGT TGCTGAACCT
GATGACATTT ACAAAGATGA CATAGAAAAC GATGGCGCAG TCAAATCAAT GGTTCCATTG
GCAGACACAT TGAACGCAGA TACCACTTTA CACAATGCTA GTTTGAACCA TTCTGAAGGA
GACCTTATCA TGAAAAGTAT CAAGCCCATC AAAAAGGGAG AGCAAGTTTA TAACAGTTAC
TTCGACCACC CTAATAGTGA AATTTTGAGA AGATACGGAT ATGTCGAATC ACAAGGATCT
CTGCACGATT TTGGTGAAGT ACCATTGTCC CTAATCAAGA GCTACTTTGT GAATAACACT
AATTTGACTG GAGAATTCCT TGATCAAATC TTTTCTATTC TCAACGATAT CTCAGAGTCC
ATGGAGGACG TAGACGAGCA GGTAGAAATT GTTTTGGACT CTTATGATTG TTATAAGAGT
AGAGAAGTGA TCACGGAGTT AGTATTTATA GTCCAAGTGT TATCAGTCAT ATCTGAAATC
AACAAGGAAG AACATCTCGA TACATTGAAT GACGAAGCAA GACAAAAGCA AATCAACCGT
ATCTTCCAGA AGTGCTACCA ACTTATCGAA GGCAAGAAGC TCACCAACAA CTTCAAGTCC
AACTTTCAAA AGATTTTGCA AACCAGATTG GAACAATACC CTGAAGTTGC CGCTCTACCA
TATGAAGATG GAGTCGCATT CACTCGTAGA AAGATGGCTG AAGTTGTGTT GAAGTCTGAA
TACCAGTCTC TAAAGAACTG TTCGGATATA ACCGAGACCT TCCAAAACGG AAAAATGGGT
AAATTCGGCT TTATCGATGA TGGTAAGTTG ATTAGAAACA TCACTAAGAA GAGGCCAGCA
GAAGAAAGTA ACGTCAGCAA GAAGAAAAAG AAGAAGGTAC AGTAA
|
|---|
| Protein sequence | MPKFDEDSQK FTTWLESSGV TISPKIAIVD LRDQHQGRAV VAVEDIDADE VLYSIPRSSL
INVTNCSLVD DHPHLKEKLQ KLGHWEGLIT VLLYELKAKK ENSKWLPYFN VLPINDKENY
QLNQLVHWSD EELKSLEPSL VLERVGKDDS LQMFNKLYPR IIIEELGLNE LEGITTEDLY
NVASLIMSYS FDVQLPKENV EEEDESQDEE GDEEEDLEVD DDDVLEGNED SEEQEEVAEP
DDIYKDDIEN DGAVKSMVPL ADTLNADTTL HNASLNHSEG DLIMKSIKPI KKGEQVYNSY
FDHPNSEILR RYGYVESQGS SHDFGEVPLS LIKSYFVNNT NLTGEFLDQI FSILNDISES
MEDVDEQVEI VLDSYDCYKS REVITELVFI VQVLSVISEI NKEEHLDTLN DEARQKQINR
IFQKCYQLIE GKKLTNNFKS NFQKILQTRL EQYPEVAALP YEDGVAFTRR KMAEVVLKSE
YQSLKNCSDI TETFQNGKMG KFGFIDDGKL IRNITKKRPA EESNVSKKKK KKVQ
|
|---|
| |