Gene PICST_44274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44274 
SymbolYMC1 
ID4838324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1078020 
End bp1078940 
Gene Length921 bp 
Protein Length306 aa 
Translation table12 
GC content45% 
IMG OID640389639 
Productmitochondrial carrier protein 
Protein accessionXP_001383492 
Protein GI126133935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG CGGTAGAAAT TGTCGATTTG ACTCCAGCTC CGGCTGCAAA CGTAGACCAT 
TCGTTAACAA GAAAAGCGAA GGATATAGCA GCTGGATTCA TCGGTGGTGC CACGCAAGTT
TTAATTGGGC AACCTGCTGA TCTTGTGAAA ATCCGTTTAC AAACGTCTCA CGAGACATCT
TCATTGTCGA TCATCAAGCA AGTCCTTAAG AATGAAGGTA TATTGGCATT CTATAAGGGA
ACTTTACCTC CACTCTTTGG TGTAGGAGTC TGTGTTTCTC TACAATTCTA TGGGTTCCAC
GAGGCCAAGA GACAAATCCT CAACTATTAC GACCAGAGCA ACTTAAATCT CTGGCCACAA
ACATATATTG CAGGTGCCGT GGCTGGTATA GTCAATACTC CCGTAGCTGG CCCTATAGAA
CAATTACGTA TCTTGAGTCA GTCGAATACT TCCACCACTA AGAATAGTCT AAGCGACACC
GTGAAAAGAA TATACCAGAC CGAAGGCATA GTCAATGGGA TATATAGAGG GTTTGGGATC
ACTTTATTGC GTGAAATCCA AGCCTACGGT GTCTGGTTTC TCACGTACGA AACGTTGATC
CAGCAGATCA TAGACTTGCA ACACTATAAA TCGAGGAACG ATATCAGCAC ACCAGAATTG
TTGGCCAGTG GTGCTTTGGC AGGTAATGCC TTGTGGTTGT CGTCGTATCC TATAGATGTG
ATCAAGTCGA ACATTCAGTC TGACAAGTTC GGCAGTGCCA GTAAGTTCAA TGGCAGAATC
AGTGCTGCTA CGAGATACAT CTACCAGACC CATGGACTCC GTGGATTCTG GAGAGGTATT
GTACCTTGCT TATTAAGAGC CGTCCCTTGT AGTGCAGGCA CGTTTGCCAG TGTAGAACTT
GCGTTGAGAT TAATGGGTTA G
 
Protein sequence
MSDAVEIVDL TPAPAANVDH SLTRKAKDIA AGFIGGATQV LIGQPADLVK IRLQTSHETS 
SLSIIKQVLK NEGILAFYKG TLPPLFGVGV CVSLQFYGFH EAKRQILNYY DQSNLNLWPQ
TYIAGAVAGI VNTPVAGPIE QLRILSQSNT STTKNSLSDT VKRIYQTEGI VNGIYRGFGI
TLLREIQAYG VWFLTYETLI QQIIDLQHYK SRNDISTPEL LASGALAGNA LWLSSYPIDV
IKSNIQSDKF GSASKFNGRI SAATRYIYQT HGLRGFWRGI VPCLLRAVPC SAGTFASVEL
ALRLMG