| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_44171 |
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| Symbol | IFR1 |
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| ID | 4838290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 62365 |
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| End bp | 63474 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389605 |
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| Product | Zinc-binding oxidoreductase alcohol dehydrogenase |
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| Protein accession | XP_001383293 |
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| Protein GI | 150864468 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.385714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAA TTAAGGTTGC AATCTCCTCT GGATCTAAGG ATGTTGGAAA ATTGACCAAG
GTCGCGACTT ACCCACCACC TGTGATCAAT GACAACCAGA TCTTATTCAA GGCTGTGGCT
TTTGCCTCAA ACCCTACTGA TTGGAAGCAT GTTGTAGCTG GATGGGGTAC CCCTGGTTCT
ATCGCTGGTT CTGATGCTAG TGGTATAGTC GTAAAAGTTG GAAAGGATGT CAAGGGCTTC
GCTGTAGGGG ATTATGTCTC CTCGGCCCTT CATGGAAATT ACAGAAAGGA TAGAGGCGCT
TTTGCCGAAT ACGTAATTGC CGATCCAATT TTCACCATCA AATACGACAA GAACACTTTC
TCTGAACAGG CTCTTCCAGT AGGCTCCAAC CCAGCTGGTA GAATCACAAA TTTTGAAGGT
GCTGCGGCGA TTACCTTGGG AGTGGCAACC ATTGGATTGT CTTTCTCTAA TAGTTTGAAA
ATTGCTAAGG ATAAGCTGAA AAATGAACTT GATTATATTT TAATCTGGGG TGGAGCCACT
GCTACTGGTA TTATCGGAAT TCAAATTGCT AAATTAGTGT ATGGATTGAA AGTTATCACG
ACTGCTTCTT CCAAGAATCA CAAATTCTTG AAGTCGTTGG GAGCGGACGA AGTATTTGAC
TACAAGGACA GTGAAGTCGT TGACCAAATT GTTAAGGCTG CCAATGGTAA CATTAAATAC
GCCTTGGATA CGGTTTCGTC CAAGCAGACA TTCCAGCAAA ACTATGATGC TACAAAGGGG
TCTACCAAAG TAGCTTTTGA TAGTTTACTA TTTTTGAGTA GCAATGATCT CAATCGTGAC
CCTCAAAGAA AGGAGGATAC TTTTGCGACG ACTAGAGTTT ATTTGGCTTC AGGGGAAAGT
TATAACAGAG AAGGACAATC TATAGTGCCA AGTAAAGAGT TGCTTGACAA CTTCAAACAT
TTCTGGGAAG AATTGATTCC TCCTTATTTA GGCCAAATTA TTACTCCTGG ATTGCGAGTT
TTGGCCCCTG GGTTGGAATC TGCAAGCGAA GCTTTGGAAT TGTTGAGACA AGACAAAGTT
AGTGGCGAAA AGGTGGTTTT CAGAATTTAG
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| Protein sequence | MAEIKVAISS GSKDVGKLTK VATYPPPVIN DNQILFKAVA FASNPTDWKH VVAGWGTPGS
IAGSDASGIV VKVGKDVKGF AVGDYVSSAL HGNYRKDRGA FAEYVIADPI FTIKYDKNTF
SEQALPVGSN PAGRITNFEG AAAITLGVAT IGLSFSNSLK IAKDKSKNEL DYILIWGGAT
ATGIIGIQIA KLVYGLKVIT TASSKNHKFL KSLGADEVFD YKDSEVVDQI VKAANGNIKY
ALDTVSSKQT FQQNYDATKG STKVAFDSLL FLSSNDLNRD PQRKEDTFAT TRVYLASGES
YNREGQSIVP SKELLDNFKH FWEELIPPYL GQIITPGLRV LAPGLESASE ALELLRQDKV
SGEKVVFRI
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