| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43743 |
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| Symbol | MDR13 |
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| ID | 4838062 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1109338 |
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| End bp | 1111185 |
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| Gene Length | 1848 bp |
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| Protein Length | 592 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389377 |
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| Product | multidrug resistance protein 3 |
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| Protein accession | XP_001383496 |
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| Protein GI | 126133943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.500194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0710927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAT CCAATTCCAA ACACAATTCT ACGGACTCAC TCGACTCCCT TGACCAGGCT
CGGCCTTACG CTCCTAGCCC ATTCGAAAAT TTTAACACAG ATGCTCAATC GGAAATCTCT
CCTATAAATT CAAGATTAAG CGGAGTCTCT TCGCGTGAAT TGAGAATTAC AAGGACAGAA
ACTGTCAAAT CGTTGCATGA ATTGGGTATG TCTAGTGACA TACCCATGCC TGCTATAAAT
CACCCACCGG TGGAAAATCC CATCTTCCCA GAAGAGTATA CCTTGGAGAC TGAAACAGGA
TTGGTTCCTG TTATGACATT GCAATCTATC GGAAGAGTGA AAACAGTAGA ACATACTGTC
AGAACACATC AAGATAACTC CTTGGTGGAG AAAAGTGAAG CACCTCTGGA AGAAGATAGC
CAAAAGAATA AGTTGGAAGC ATTAGATCCC GAAATTGAAT TCGTCACTTT TGTTGTTGGT
GATCCAGAAA ATCCTCACAA CTGGGATATG ACCTACAAGT GGATTCTTAC TTTAACATTG
GCCATCTTTG TCGTGTGTGC CGCTTACGGT TCTTCCTGTT TGGCTGGTGG TTTGCCAACT
ATTAACAAGA AATTTGGTGT TTCCACCGAA GTATCAACAT TGACTGTCTC ATTGATGGTC
ATCGGTTTCA CCGTTGGTCC ATTGATCTGG GCACCATTAT CAGAGCAAAT CGGCAGAAGA
CCAGTTTACT TTATCTCCTT TGGTCTCTAC ACTATTTTCC AAATTCCTTG TGCTTTAGCC
CCAAATATTG GTGCTCTCTT GGTTTGTCGT TTCTTATGTG GTGTTTTTGC GTCATCGGCA
CTTACAAATG TTGGTGCTAG TCTTGTTGAC ATTCACAATG AAACAAGATC TTTAGCAATT
GCATTCTTTT CCTTCGCACC CTACTCTGGT CCAGTCTTAG GTGGTGTTGT CAATGGATTT
ATCAGTGTCT CCACAAAAAG AATGGATTTG ATTATCTGGG TTAACATGGC ATTTGCTGGT
GTCATGTGGA TTATCGTCAG TTTAATTCCT GAAACTTATG CTCCAGTTAT TTTGAAAAAG
AGAGCAAAGA AATTGAGAGA AGAGACGGGA AACCCAAAGA TAATGACAGA GCAGGAAGCC
ACTCCTCTAT CCATGAAAGA ATTGGTCAAC GATAATCTTA TTAGACCATT GAAGTTTATT
GTTGAAGAAC CAGTTTTAGA CTTGATTTGT GCATTTGTTG CCTTGATTTA CTCCTTATTG
TACGCATTCT TCTTTGCCTA CCCAGTTATA TTCAACAGAC TCTATGGTTA TGAGGACAAC
ATTATCGGAT TGATGTATAT ACCAATTTTA ATCGGTGCTG GTTTGGCATT GTGCACAACT
CCCATCCTTG AAATGAAGTA TGCTGCATTA TGTAAAAGAA GAACTCCAAC TCCAGAAGAT
AGATTAATTG GTGCCATTAT CGGTGCCCCA TTTCCATGCA TTTCTTTGTT CATATTGGGA
GCAACTTCGT ACAAACACAT CATCTGGGTC GGTCCTGCTT CTTCGGGCAT TGCTTTCGGG
TACGGTATGG TTCTTATCTA CTACTCGCTT AATAACTACA TCATTGACAC CTACGCCAAA
TATGCTGCAT CCGCTTTGGC TACAAAGGTC TTCTTGAGAA GTTCTGGGGG TGCTGCATTT
CCATTGTTCA TTACTCAAAT GTACGACAAA CTTGGCTTGC AATGGGCAAG TTGGTTGTTA
GCTTTTATCT CCCTTGCTAT GGTGTTTATA CCAATATCGT TCTACAAGTA TGGAAAAACA
TTAAGAGCAA AGATGTGCAA GGAAGACTAC TCGGCAGTTC ATTTATAG
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| Protein sequence | MSTSNSKHNS TDSLDSLDQA RPYAPSPFEN FNTDAQSEIS PINSRLSGVS SRELRITRTE
TVKSLHELGM SSDIPMPAIN HPPVENPIFP EEYTLETETG LVPVMTLQSI GRVKTVEHTN
KLEALDPEIE FVTFVVGDPE NPHNWDMTYK WILTLTLAIF VVCAAYGSSC LAGGLPTINK
KFGVSTEVST LTVSLMVIGF TVGPLIWAPL SEQIGRRPVY FISFGLYTIF QIPCALAPNI
GALLVCRFLC GVFASSALTN VGASLVDIHN ETRSLAIAFF SFAPYSGPVL GGVVNGFISV
STKRMDLIIW VNMAFAGVMW IIVSLIPETY APVILKKRAK KLREETGNPK IMTEQEATPL
SMKELVNDNL IRPLKFIVEE PVLDLICAFV ALIYSLLYAF FFAYPVIFNR LYGYEDNIIG
LMYIPILIGA GLALCTTPIL EMKYAALCKR RTPTPEDRLI GAIIGAPFPC ISLFILGATS
YKHIIWVGPA SSGIAFGYGM VLIYYSLNNY IIDTYAKYAA SALATKVFLR SSGGAAFPLF
ITQMYDKLGL QWASWLLAFI SLAMVFIPIS FYKYGKTLRA KMCKEDYSAV HL
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