Gene PICST_43701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_43701 
SymbolDAL3 
ID4837779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1305575 
End bp1306219 
Gene Length645 bp 
Protein Length214 aa 
Translation table12 
GC content46% 
IMG OID640389094 
Productureidoglycolate hydrolase 
Protein accessionXP_001383536 
Protein GI150864635 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0187342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.177859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTAA ATACTTTTAC AGTGGGTGGT ATACCTGCCA TAACAGCTGA GCCATTAACG 
CCAGAAGCGT TCGCTCCATT TGGTGGAGTC ATTAGTGCTG ACCATCAGAT AGAGAACGCA
GCCAGCTCTT CAGCCAACTA TGGCACTGCT ACCAAGATCC ATAAGGTAGC ACCCATAGTG
AACAACTACG ACAAGTGCCC CAGTGGAGTA GTTGCCACTG CCAATTGGAA TATTTTCCGA
TGTACAGCCC CTAAGCATTT GATACTGGAC TACGGAACTT ACAAGAGATA CACTTCCAAA
GTATTGGAAA GACATCCTTT CTCAACACAG ACCTTTTTAC CTATGGGACA AGATCTTCAT
AAGGTATCGT ACTTGGTCAT TGTCGCAGCC AACGATCCTC ATTCTGGAGC ACAAGTGCTA
CCTGATCCAT CTACAGTACG CGCCTTTGTC TGTAAAGGGA ACCAATCTGT AACCTACGGT
GCTGGCACCT GGCATGCTCC TATGGTGGTG ATAGATGAAG AGACAGCGCA TATAGACTTT
GCTGTGTTCA TCCACGAGAA TGGAGTAGCT GACGAAGATT GCCAAGAGTG TTACTTTAAG
CCTGGTTTCT CTATCAACTA TGAAAAAGTC AACCATAAGC TATAG
 
Protein sequence
MPLNTFTVGG IPAITAEPLT PEAFAPFGGV ISADHQIENA ASSSANYGTA TKIHKVAPIV 
NNYDKCPSGV VATANWNIFR CTAPKHLISD YGTYKRYTSK VLERHPFSTQ TFLPMGQDLH
KVSYLVIVAA NDPHSGAQVL PDPSTVRAFV CKGNQSVTYG AGTWHAPMVV IDEETAHIDF
AVFIHENGVA DEDCQECYFK PGFSINYEKV NHKL