Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_43575 |
Symbol | |
ID | 4838156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 718571 |
End bp | 719512 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389471 |
Product | predicted protein |
Protein accession | XP_001383421 |
Protein GI | 126133793 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.121659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTAG ATGTGGATAG CGTCATAGAC AGATTACTTG CTGTTGGAAT GACTAAACCA AAATCTTCTT CCAGTCGCCA CACCAAGGAT AAGTTGCCTG TGACAAGTTC CGAGATTAAA TTTATCTTAC ATAAGGCCCG CTCTATCTTC TTGGACCAGC CTACTTTATT AAGATTGTCA CCTTCAGTAA AGATTGTAGG TGACATCCAT GGCCAGTTCC ATGACTTGAT CCGTATCTTC AACACCTGTG GCTATCCTCC ATACTCGAAC TACTTGTTCT TGGGAGACTA TGTGGATCGT GGGCACAAGT CTTTAGAAAC CATTCTTCTT TTATTATGTT ACAAGATTAA GTATCCTGAG AACTTTTTTA TGTTGAGAGG TAATCATGAG TCAGCTAACA TCACGAAGAT CTACGGTTTC TATGACGAGT GTAAGAGAAG ATTGCCTGCT ATCTCTGGCA ATCATAAGAT GTGGAAAGTC TTCATTGACG TTTTCAACAC ATTGCCCATT GCTGCAACGA TCAACGATAA GATATTCTGT ATCCATGGAG GCTTGTCACC AGACTTGCAT GACTTGGAAC AGATCGACAA CATAAGGAGA CCTACAGACA TTCCTGAGCG AGGCTTATTG GCCGACTTAC TTTGGTCTGA TCCTGATCCT GCAATCAAGA ACTTCAGTGT TACCAACTGG CCTAAAAACG ACCGTGGTGT ATCTTACTGC TTCGGTAAGA AACACGTTGA CTATTTCTGC TCCACATTCA AAATGGATTT GGTAGTCAGA GGCCACATGG TCGTTGAAGA TGGTTACGAA TTTTTCAATA AGAGAAAGTT GGTGACAGTT TTCTCGGCTC CCAACTATTG TGGAGAGTTC GACAATTTTG GTGCTGTCAT GAGTGTGGAC AAGAACTTGT ACTGTTCGTT TGAACTACTC AAACCACAGT GA
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Protein sequence | MDVDVDSVID RLLAVGMTKP KSSSSRHTKD KLPVTSSEIK FILHKARSIF LDQPTLLRLS PSVKIVGDIH GQFHDLIRIF NTCGYPPYSN YLFLGDYVDR GHKSLETILL LLCYKIKYPE NFFMLRGNHE SANITKIYGF YDECKRRLPA ISGNHKMWKV FIDVFNTLPI AATINDKIFC IHGGLSPDLH DLEQIDNIRR PTDIPERGLL ADLLWSDPDP AIKNFSVTNW PKNDRGVSYC FGKKHVDYFC STFKMDLVVR GHMVVEDGYE FFNKRKLVTV FSAPNYCGEF DNFGAVMSVD KNLYCSFELL KPQ
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