Gene PICST_43575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_43575 
Symbol 
ID4838156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp718571 
End bp719512 
Gene Length942 bp 
Protein Length313 aa 
Translation table12 
GC content42% 
IMG OID640389471 
Productpredicted protein 
Protein accessionXP_001383421 
Protein GI126133793 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.121659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTAG ATGTGGATAG CGTCATAGAC AGATTACTTG CTGTTGGAAT GACTAAACCA 
AAATCTTCTT CCAGTCGCCA CACCAAGGAT AAGTTGCCTG TGACAAGTTC CGAGATTAAA
TTTATCTTAC ATAAGGCCCG CTCTATCTTC TTGGACCAGC CTACTTTATT AAGATTGTCA
CCTTCAGTAA AGATTGTAGG TGACATCCAT GGCCAGTTCC ATGACTTGAT CCGTATCTTC
AACACCTGTG GCTATCCTCC ATACTCGAAC TACTTGTTCT TGGGAGACTA TGTGGATCGT
GGGCACAAGT CTTTAGAAAC CATTCTTCTT TTATTATGTT ACAAGATTAA GTATCCTGAG
AACTTTTTTA TGTTGAGAGG TAATCATGAG TCAGCTAACA TCACGAAGAT CTACGGTTTC
TATGACGAGT GTAAGAGAAG ATTGCCTGCT ATCTCTGGCA ATCATAAGAT GTGGAAAGTC
TTCATTGACG TTTTCAACAC ATTGCCCATT GCTGCAACGA TCAACGATAA GATATTCTGT
ATCCATGGAG GCTTGTCACC AGACTTGCAT GACTTGGAAC AGATCGACAA CATAAGGAGA
CCTACAGACA TTCCTGAGCG AGGCTTATTG GCCGACTTAC TTTGGTCTGA TCCTGATCCT
GCAATCAAGA ACTTCAGTGT TACCAACTGG CCTAAAAACG ACCGTGGTGT ATCTTACTGC
TTCGGTAAGA AACACGTTGA CTATTTCTGC TCCACATTCA AAATGGATTT GGTAGTCAGA
GGCCACATGG TCGTTGAAGA TGGTTACGAA TTTTTCAATA AGAGAAAGTT GGTGACAGTT
TTCTCGGCTC CCAACTATTG TGGAGAGTTC GACAATTTTG GTGCTGTCAT GAGTGTGGAC
AAGAACTTGT ACTGTTCGTT TGAACTACTC AAACCACAGT GA
 
Protein sequence
MDVDVDSVID RLLAVGMTKP KSSSSRHTKD KLPVTSSEIK FILHKARSIF LDQPTLLRLS 
PSVKIVGDIH GQFHDLIRIF NTCGYPPYSN YLFLGDYVDR GHKSLETILL LLCYKIKYPE
NFFMLRGNHE SANITKIYGF YDECKRRLPA ISGNHKMWKV FIDVFNTLPI AATINDKIFC
IHGGLSPDLH DLEQIDNIRR PTDIPERGLL ADLLWSDPDP AIKNFSVTNW PKNDRGVSYC
FGKKHVDYFC STFKMDLVVR GHMVVEDGYE FFNKRKLVTV FSAPNYCGEF DNFGAVMSVD
KNLYCSFELL KPQ