| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43525 |
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| Symbol | AMI1 |
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| ID | 4837720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 677707 |
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| End bp | 679272 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389035 |
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| Product | Glutamyl-tRNA(Gln) amidotransferase subunit A (amidase) |
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| Protein accession | XP_001383413 |
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| Protein GI | 126133777 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.227473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCCAGTGACA ACTCTATTAC GCGTGAGGAC TTGCGAAACC AAGTTGAAAA ATTGAAGGTG
AAATTGAATG ATGAAGAAGA GGATGACTAC TATACCTTGC TTGCAGCCAT GGATTCTTCC
ATCAAAAAGG TGTTGGATAT GGATGATTTT TATCTACCCA CAGACTATGA GCGTTTTCCC
AGAAAAAATA TTCATAGACC AGTAGGTGTA GATAACGAAG CTAATGCTTG GGCCTATAGG
GTCGAAATAG AAGATACTAA GCCCGAAATG TCGAAAAGCA GACCACTTGC TGGTCGTACA
ATCACCTTTA AAGATTGCGT AGAAGTTGGT AAGGTTCCGC AAATTGGAGG TACCGATTCA
TGGAAGCCAT GGACACCTGA AGCTGATGCT ACAGTTGTCA CCCGAGCCTT AGAGGCTGGT
GCAAAGCTTG TTGGATTGGC TACCTGTGAA AACCAGTGTT CTTCTACCTC TTCTAGTACT
TCTTCTACTG GTGATGTTCC CAACCCATAC GGTAAGTCCC ATTCAGCTGG TGGTAGCAGT
TCTGGGTGTG GTTATTTGGT GGGTACTGGC GAAGTTGACC TTGCAGTGGG TGCTGATCAA
GGTGGTTCTA TCAGAGTGCC AAGTTGTCAA TGTGGTATAG TTGGCTTGAA ACCAACTTTC
GGTCTTATTC CTTACTCTGG CATTGGAAGT AACGAGTTTA ACAATGATCA CGCTGGTCCA
ATGACAAAAG ATGTACTCGA CAATGCTCTT CTTCTTGGTG TTCTTGCCGG CGTTGATGGC
TTTGATGACC GACAAATGGG TGCTCCTCTC TACAAAGATG TTCCAGATTA CACGAAGTTA
GTCAAGGAAA GCTCCGTCAA AGGTATGAAA ATCGGCATCT TGAAGGAGTC ATTGGAAGTT
CCAGCCATGA CTGAAGCAAT GAAGGAAAAA TTTCTACATC AGGCAAAGTT GTGGGAAGCT
TTGGGAGCTG AAGTGGTTGA AGTATCTATC CCTTACCATC ACATCGCTCC TGAAATATGG
ATGACTGGTC AAAGAGTTGC TGGTGCAGTC AGAAAGTTAG GTATGCAATG TGGTAGACGT
GTCGTGCAAT CTAGTAAAGC TATTGACCAC TGCTATCCTT GGACTCAAGA ATCTTTCGAA
AAGGCACCAG TCAATGTCAA GAACGGGCTC ATCAACGGTT TGTATCTCAT GGAAAAGCAC
CCAGGAATCT ACGTGAAAAC TATTAACCTC AGTTTCAAAG CTAGAGCTGA ATATGATAAA
GCTCTTGAAA CGGTTGATGT GTTGATCACA CCAACTGTTC CCTTTGCTGC TCCACGCCAT
GGTGACAGAA AAGCTAGTCC AATAAAAAGG ATTAAAAATA CTATTGGTCT AAACGCTAAC
ACGGGTATCT TTAACATTAC TGGACATCCA GCTTTGACTT TCCCTATGGG ATTCTTGGCT
TCTCAAGAGG ATCCAGACAT GAAATTCCCT GTTGGTATAC AAATAATCGG TAAGCATTTT
GACGAGCAAT CAGTATATGC TGCTGCATAT GCATGGGAAC AAGCATACAA CTGGAAGGAC
TATTAA
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| Protein sequence | SSDNSITRED LRNQVEKLKV KLNDEEEDDY YTLLAAMDSS IKKVLDMDDF YLPTDYERFP
RKNIHRPVGV DNEANAWAYR VEIEDTKPEM SKSRPLAGRT ITFKDCVEVG KVPQIGGTDS
WKPWTPEADA TVVTRALEAG AKLVGLATCE NQCSSTSSST SSTGDVPNPY GKSHSAGGSS
SGCGYLVGTG EVDLAVGADQ GGSIRVPSCQ CGIVGLKPTF GLIPYSGIGS NEFNNDHAGP
MTKDVLDNAL LLGVLAGVDG FDDRQMGAPL YKDVPDYTKL VKESSVKGMK IGILKESLEV
PAMTEAMKEK FLHQAKLWEA LGAEVVEVSI PYHHIAPEIW MTGQRVAGAV RKLGMQCGRR
VVQSSKAIDH CYPWTQESFE KAPVNVKNGL INGLYLMEKH PGIYVKTINL SFKARAEYDK
ALETVDVLIT PTVPFAAPRH GDRKASPIKR IKNTIGLNAN TGIFNITGHP ALTFPMGFLA
SQEDPDMKFP VGIQIIGKHF DEQSVYAAAY AWEQAYNWKD Y
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