| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43336 |
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| Symbol | SPS23 |
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| ID | 4837937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1809054 |
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| End bp | 1809815 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640389252 |
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| Product | Glucose 1-dehydrogenase peroxisomal 2,4- dienoyl-CoA reductase |
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| Protein accession | XP_001383633 |
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| Protein GI | 126134217 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCA ACTTCACTGA CAAGGTTGTT ATCGTCACCG GCGGTCTTTC CGGTATTGGT
CTTGCTGCTA CCATCAAGTT GCTTGACGCT GGCGCTAAAG TTATCATCGG TGATATTCAA
GACGCTGAGG CTGCCAAGCC AATCGTAGAA GGTATCATCG CTAAGACTGG CAAGAAGGAT
GTTGTCCACT TCCAAATCGA TGTCACCAAC TATGACCAAA ACCAGGCCAT GATTGACTTT
GCTGTCAAGA CCTTTGGTGA CTTGCATCAT GTTTTCGCCA ACGCTGGTAT CAATAAGCAC
TCCTACGCTC ACGAAATGTC CTTCGACTTG TGGAAGAAAG TTCTTGATGT CAACTTGAAT
TCTGTCTTCG CTTTGGACAA GCTCGCTATC AAGTACTGGT TGGAGAACGA CAAGAAGGGT
TCTATTGTAA ACACCTCCTC TATGCTCTCT AACATTGCCA ACTTGGGTAT GGCCCACTAC
TGTGCATCTA AGGCTGGTGT AAAGCTTTTG ACCAAATCTT TGGCAGTTGA ATACGGTAGA
AAGGGTATCA GAGTCAACGC TGTCGACCCA GCCTACATCA AGACTCCATT ATTGGACATC
TTACCACAAG ACCAATATGA CGCTTTGGTC TCCTTGCATC CAATTGGTAG ATTAGGTGAG
CCAGAAGAAG TTGCTTCTGC TGTCCTATTC TTGTTGTCTG ACGAAGCATC GTATGTTAAC
GGTGCCTCCT TGTTAGTTGA CGGTGCTTAC ACTGCACAAT AA
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| Protein sequence | MAFNFTDKVV IVTGGLSGIG LAATIKLLDA GAKVIIGDIQ DAEAAKPIVE GIIAKTGKKD
VVHFQIDVTN YDQNQAMIDF AVKTFGDLHH VFANAGINKH SYAHEMSFDL WKKVLDVNLN
SVFALDKLAI KYWLENDKKG SIVNTSSMLS NIANLGMAHY CASKAGVKLL TKSLAVEYGR
KGIRVNAVDP AYIKTPLLDI LPQDQYDALV SLHPIGRLGE PEEVASAVLF LLSDEASYVN
GASLLVDGAY TAQ
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