Gene PICST_43155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_43155 
Symbol 
ID4838027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp946753 
End bp947040 
Gene Length288 bp 
Protein Length95 aa 
Translation table12 
GC content44% 
IMG OID640389342 
Productpredicted protein 
Protein accessionXP_001383466 
Protein GI126133883 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5051] Ribosomal protein L36E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.382451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.720699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGAATTGCTG TTGGATTAAA CAAGGGTCAC AAGACTACCG CTAAGGAAGT TGCTCCAAAG 
ATCTCTTACA GAAAGGGTGC TCTTTCCAAG AGAACCGACT TCGTCAGAAA CATCGTCAAG
GAAGTTGCTG GCTTAGCCCC ATACGAAAGA AGATTGATCG AATTGATCAG AAACGCCGGT
GAAAAGAGAG CTAAGAAGTT GGCCAAGAAG AGATTGGGTA CCCACAAGAG AGCCTTGAAG
AAGGTTGAAG AAATGAACAA GGTCATTGCT GAAACCAGAA GACACTAA
 
Protein sequence
GIAVGLNKGH KTTAKEVAPK ISYRKGALSK RTDFVRNIVK EVAGLAPYER RLIELIRNAG 
EKRAKKLAKK RLGTHKRALK KVEEMNKVIA ETRRH