Gene PICST_42900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_42900 
SymbolGLR1 
ID4837975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp386231 
End bp387700 
Gene Length1470 bp 
Protein Length489 aa 
Translation table12 
GC content46% 
IMG OID640389290 
Productglutathione reductase 
Protein accessionXP_001383703 
Protein GI126134357 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01421] glutathione-disulfide reductase, animal/bacterial 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.113846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCTG TTTCTGCGCA CAATACATTT GACTATCTCG TGATTGGAGG TGGCTCTGGA 
GGAGTTGCTT CAGCCCGTAG AGCTGCCAAA TATGGAGCTC GAGTATTGTT GATCGAAGGT
AAATACCACA AGATGGGTGG TACCTGTGTC AATGTCGGCT GTGTTCCCAA GAAGCTTATG
TGGCACGCTG CTGACTTGGC TCACAAGAAA CACCATATGA AATCGTACGG ATTGGCTTCA
TCCGAGGAAG AAATCAAGTA CGGGGATTTC AACTGGGGTT TGATGAAAGA GAAGAGAGAC
GCTTACGTCA GAAAGTTGAA TGGAATCTAT GAGAACAACT TGAACAGAGA AGGCGTCAAC
TATCTCTTTG GTTACGCCAA GTTCATCAAT TCCGAGGGCG ATGTAGAAGT CACGTTATCT
GGAGACCAGG AGATCAAGTT CTTGGAAGAG GGCAAGACAT TCAAGAAGGA TGAGAAGCTT
GTATTTGCTG GTAAGAAAGT GTTGATCGCC ACCGGAGGTG CACCTATTGT TCCTCCAAAG
GTACCTGGTG CTGAATTGGG TATCACTTCA GATGGGTTCT TTGAATTAGA GAAGCAACCT
AAATCTGTGG CTGTAGTTGG AGCTGGTTAT ATTGGAGTTG AGTTCTCTGG TGTTTTCAAC
GGCTTGGGTT CAGAAACCCA CTTCATTATC AGAGGTGACA CCGTATTGAG GTCGTTTGAT
GACATCATCC AGACTACAAT CACCGACTAC TACACAGATA AGTTGGGCAT CAACATATAC
AAACAGTCCG GTGGTGTCAC TAAGGTTGAA AAGACGGCAG ACGGCAAGAA GAAGGTGTTT
TTGGGTAACG GTAAGACTTT AGAAGTAGAT GAGTTGGTCT GGACCGTAGG CAGAAAATCG
TTGATTGATC TCAGCTTAGA TAAGGTCGGC GTAAAACTCA ACGATAAGTT GCAAGTTTCA
ACAGATGAGT TCCAGAGAAC AGCCAATCCC AAGATATTCT CGCTTGGAGA CGTAGTAGGC
AAAGTGGAAT TGACTCCGGT TGCCATTGCT GCTGGTCGTA GGTTGTCCAA CAGATTGTTT
GGACCAGAGA TCTTCGCCGA GGACAAGTTG GACTACAATA ATGTTCCATC GGTGATCTTC
TCACATCCTG AAGCTGGTTC CATTGGTTTA TCCACCAAGG AAGCTATTGC CAAATACGGC
GAAGAAAATA TCAAGGTGTA CAACTCCAAA TTCACCCAGA TGTACTACGG GTTGGTAGAC
CACGACGAAT TCAAGTCGCC TACAGCTTAT AGAATCGTCT GTTTGCTTCC TGAAGAAAAG
GTCGTAGGTC TTCACATTGT GGGAGACTCT TCTGCCGAAA TCTTACAAGG CTTTGGAGTC
GCCGTGAAGA TGGGAGCTAC CAAGAAGGAC TTCGATAACT GTGTGGCCAT CCATCCTACG
GCTGCTGAAG AGTTGGTCAC CATGGTCTAA
 
Protein sequence
MAPVSAHNTF DYLVIGGGSG GVASARRAAK YGARVLLIEG KYHKMGGTCV NVGCVPKKLM 
WHAADLAHKK HHMKSYGLAS SEEEIKYGDF NWGLMKEKRD AYVRKLNGIY ENNLNREGVN
YLFGYAKFIN SEGDVEVTLS GDQEIKFLEE GKTFKKDEKL VFAGKKVLIA TGGAPIVPPK
VPGAELGITS DGFFELEKQP KSVAVVGAGY IGVEFSGVFN GLGSETHFII RGDTVLRSFD
DIIQTTITDY YTDKLGINIY KQSGGVTKVE KTADGKKKVF LGNGKTLEVD ELVWTVGRKS
LIDLSLDKVG VKLNDKLQVS TDEFQRTANP KIFSLGDVVG KVELTPVAIA AGRRLSNRLF
GPEIFAEDKL DYNNVPSVIF SHPEAGSIGL STKEAIAKYG EENIKVYNSK FTQMYYGLVD
HDEFKSPTAY RIVCLLPEEK VVGLHIVGDS SAEILQGFGV AVKMGATKKD FDNCVAIHPT
AAEELVTMV