Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42900 |
Symbol | GLR1 |
ID | 4837975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 386231 |
End bp | 387700 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640389290 |
Product | glutathione reductase |
Protein accession | XP_001383703 |
Protein GI | 126134357 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01421] glutathione-disulfide reductase, animal/bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.113846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCTG TTTCTGCGCA CAATACATTT GACTATCTCG TGATTGGAGG TGGCTCTGGA GGAGTTGCTT CAGCCCGTAG AGCTGCCAAA TATGGAGCTC GAGTATTGTT GATCGAAGGT AAATACCACA AGATGGGTGG TACCTGTGTC AATGTCGGCT GTGTTCCCAA GAAGCTTATG TGGCACGCTG CTGACTTGGC TCACAAGAAA CACCATATGA AATCGTACGG ATTGGCTTCA TCCGAGGAAG AAATCAAGTA CGGGGATTTC AACTGGGGTT TGATGAAAGA GAAGAGAGAC GCTTACGTCA GAAAGTTGAA TGGAATCTAT GAGAACAACT TGAACAGAGA AGGCGTCAAC TATCTCTTTG GTTACGCCAA GTTCATCAAT TCCGAGGGCG ATGTAGAAGT CACGTTATCT GGAGACCAGG AGATCAAGTT CTTGGAAGAG GGCAAGACAT TCAAGAAGGA TGAGAAGCTT GTATTTGCTG GTAAGAAAGT GTTGATCGCC ACCGGAGGTG CACCTATTGT TCCTCCAAAG GTACCTGGTG CTGAATTGGG TATCACTTCA GATGGGTTCT TTGAATTAGA GAAGCAACCT AAATCTGTGG CTGTAGTTGG AGCTGGTTAT ATTGGAGTTG AGTTCTCTGG TGTTTTCAAC GGCTTGGGTT CAGAAACCCA CTTCATTATC AGAGGTGACA CCGTATTGAG GTCGTTTGAT GACATCATCC AGACTACAAT CACCGACTAC TACACAGATA AGTTGGGCAT CAACATATAC AAACAGTCCG GTGGTGTCAC TAAGGTTGAA AAGACGGCAG ACGGCAAGAA GAAGGTGTTT TTGGGTAACG GTAAGACTTT AGAAGTAGAT GAGTTGGTCT GGACCGTAGG CAGAAAATCG TTGATTGATC TCAGCTTAGA TAAGGTCGGC GTAAAACTCA ACGATAAGTT GCAAGTTTCA ACAGATGAGT TCCAGAGAAC AGCCAATCCC AAGATATTCT CGCTTGGAGA CGTAGTAGGC AAAGTGGAAT TGACTCCGGT TGCCATTGCT GCTGGTCGTA GGTTGTCCAA CAGATTGTTT GGACCAGAGA TCTTCGCCGA GGACAAGTTG GACTACAATA ATGTTCCATC GGTGATCTTC TCACATCCTG AAGCTGGTTC CATTGGTTTA TCCACCAAGG AAGCTATTGC CAAATACGGC GAAGAAAATA TCAAGGTGTA CAACTCCAAA TTCACCCAGA TGTACTACGG GTTGGTAGAC CACGACGAAT TCAAGTCGCC TACAGCTTAT AGAATCGTCT GTTTGCTTCC TGAAGAAAAG GTCGTAGGTC TTCACATTGT GGGAGACTCT TCTGCCGAAA TCTTACAAGG CTTTGGAGTC GCCGTGAAGA TGGGAGCTAC CAAGAAGGAC TTCGATAACT GTGTGGCCAT CCATCCTACG GCTGCTGAAG AGTTGGTCAC CATGGTCTAA
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Protein sequence | MAPVSAHNTF DYLVIGGGSG GVASARRAAK YGARVLLIEG KYHKMGGTCV NVGCVPKKLM WHAADLAHKK HHMKSYGLAS SEEEIKYGDF NWGLMKEKRD AYVRKLNGIY ENNLNREGVN YLFGYAKFIN SEGDVEVTLS GDQEIKFLEE GKTFKKDEKL VFAGKKVLIA TGGAPIVPPK VPGAELGITS DGFFELEKQP KSVAVVGAGY IGVEFSGVFN GLGSETHFII RGDTVLRSFD DIIQTTITDY YTDKLGINIY KQSGGVTKVE KTADGKKKVF LGNGKTLEVD ELVWTVGRKS LIDLSLDKVG VKLNDKLQVS TDEFQRTANP KIFSLGDVVG KVELTPVAIA AGRRLSNRLF GPEIFAEDKL DYNNVPSVIF SHPEAGSIGL STKEAIAKYG EENIKVYNSK FTQMYYGLVD HDEFKSPTAY RIVCLLPEEK VVGLHIVGDS SAEILQGFGV AVKMGATKKD FDNCVAIHPT AAEELVTMV
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