Gene PICST_42867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_42867 
SymbolFRE1.4 
ID4837884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1314676 
End bp1316784 
Gene Length2109 bp 
Protein Length702 aa 
Translation table12 
GC content42% 
IMG OID640389199 
Productferric reductase transmembrane component (6 domains)(Ferric-chelate reductase) 
Protein accessionXP_001383539 
Protein GI150864637 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCTA TTAACAAGTT GGCATTGGCT GCGGTCTTCA TGGGCTTGAC ACAAGCCGAG 
GTAGCCTTTC ATATTAACCG TAAAAAGGAA TTCGCTGTTC AAGCTTGTAC TGCTCTTGTG
GGTAAAACAG CTACCTACTT CCTTCCAACT GATAAAGTTG GTTACTGTAA CGTCAATAAC
CAACCAGCCT TGGGTACCTA TGCTTACTGT ATCGAACAAA TTCCTTACAA GGATGCAAGA
AAGAACTTTT TAGATTCTTG TGCACCTTTC CACTTAACCG AAGAACAGTA CTTGGACGCA
TACCACAATG CCTCCAACTA CTTGACCAAC ACAACTGCTG ATCCTAGCTT CAATATATCA
AAGGTCTACA ACAAGCCTGC TATTTTGAGT AAGAAGAAGA TCATTGGAGC CTGGGATTCT
GAAGTTGGTA GATGGTACAA TTATAACTAT GCTGCTTGGT TCGGTATTGC CTTAATCTGT
TACTGGTACT TCGTTATGTT GGTTGCTGGT CTCTGTAACT TGACGTACTT CATCGCTCCT
AATTTTGTCA AGTCATTGAC TGGGGGTATT TCTAACACCT TCAGAAAGAC CATTTCTTTG
CCAGCAACAT TTGGTAAGAC TCACGCTCAC CATAAGCAAT TTTTGCGTTA CATTCTTATT
TTAATTCCAA CTAGATTGGA ATCAATCTTG GTTTTTGTCT GGATAAGTTT GGCAATCATC
TTATCAGCTA TTCTCTTCCA TCACGATAGT CCCAACGTCA TTTGGCCACA GGGTCCTCTG
ACAGAAATTG GAAGAAAGGT TGCCGATAGA TCTGGATTGA TTGTCGGTTG GCTCTCTCCA
TCCTTGATCT TGTTTGCTGG TAGAAACAAT TTCATGCAAT GGTTATCGGG CTGGACATAT
TCCAGATTTA TCTTGGTTCA CAAGTGGATG TCTAGAATTG CATTTCTCTT GTGTGTCGTT
CACGGTGTTG GTATGACCTT TAATGGTAAA GGTCTTGGTA AGTACGATAC ACGTAACGCT
CAAATCTATG TTCGTACTGG TTACGTGGCT CTTATAGCTG CTTCTATCAT GGTCTTCCAG
TCCCTTTTGG TATTCAGAAG AACAAACTAC GAATTGTTCT TACTTGTTCA CATTGCCATG
GCCCTCTTGT TCATTGCAGG AGCATGGCAT CACACTGCAA ATGATGGTTA CCACCAATGG
TACATCGCCT CTGCCGCTGT TTGGGCTTTT GATCGTGTTG TAAGAATTGG AAGATTGTTT
TCTTTTGGTG TTCGTTCTGC ACAAGTTGAG TTGATTGCCA ACGAAACCTT GAAGGTCAGT
GTCTCTAGAC CAGCTTACTG GAAGCCTTTC CCAGGTTGTC ACGCCTTCAT TCATTTCCTT
AAGCCAACCA TGTTCTGGCA ATCTCATCCA TTCACCATTG TTGATTCTGC TATTGATACC
AATACCATCA CTTTTTACTT AAAGGTTAAG GGAGGTATTA CCCATGGTTT ATACCAGTAC
TTGTCCAAGC AACCAGACAA CAAAGCCACC ATCAAGGTTT CTGTTGAGGG ACCATATGGT
GCCCCAATTT CTATTAAGAA GTACGAAAAT TCGGTTTTCA TTGCCGGTGG TAATGGTGTT
CCAGGTCTCT ATTATGAAGC AACTGATATT GCCAAGAAGA ACGAAAAGAC AAACATTAAG
TTCTATTGGG TTATTCGTCA CTACAGAAGT GTTGAATGGT TCTATGCCGA ATTATGCAAG
CTTAAGCAAA TGGGCATTGA AACAATTATT TATGTCACAC AGCCTCATGT TGGATTGACC
AACCCAATTG TTTCTAAGAA TATCGACTCT AGTGAAGATG AAGAAGAGCA GCAAGAAAAG
GGTGCTGGAT CGGAATCTGA TGACTACATC TCAGTCTTGA AGAAGGACTT GTCGCACATC
GAATTCAGAG AAGGAAGACC AGACGTCTAC AACATTGTTG ACGAAAGCAT AAAGGAAGCT
AACGGCCCAA TTGCATTTGC TACTTGTGCC CATGCTACTA TGGTTGACGA TGCCAGAAAG
TCTGTCAGAG ATAACCTTCA AGCCACTAAG TACAGAGTTG AGTTGTTTGA ACAAATTCAA
ATGTGGTAA
 
Protein sequence
MVAINKLALA AVFMGLTQAE VAFHINRKKE FAVQACTALV GKTATYFLPT DKVGYCNVNN 
QPALGTYAYC IEQIPYKDAR KNFLDSCAPF HLTEEQYLDA YHNASNYLTN TTADPSFNIS
KVYNKPAILS KKKIIGAWDS EVGRWYNYNY AAWFGIALIC YWYFVMLVAG LCNLTYFIAP
NFVKSLTGGI SNTFRKTISL PATFGKTHAH HKQFLRYILI LIPTRLESIL VFVWISLAII
LSAILFHHDS PNVIWPQGPS TEIGRKVADR SGLIVGWLSP SLILFAGRNN FMQWLSGWTY
SRFILVHKWM SRIAFLLCVV HGVGMTFNGK GLGKYDTRNA QIYVRTGYVA LIAASIMVFQ
SLLVFRRTNY ELFLLVHIAM ALLFIAGAWH HTANDGYHQW YIASAAVWAF DRVVRIGRLF
SFGVRSAQVE LIANETLKVS VSRPAYWKPF PGCHAFIHFL KPTMFWQSHP FTIVDSAIDT
NTITFYLKVK GGITHGLYQY LSKQPDNKAT IKVSVEGPYG APISIKKYEN SVFIAGGNGV
PGLYYEATDI AKKNEKTNIK FYWVIRHYRS VEWFYAELCK LKQMGIETII YVTQPHVGLT
NPIVSKNIDS SEDEEEQQEK GAGSESDDYI SVLKKDLSHI EFREGRPDVY NIVDESIKEA
NGPIAFATCA HATMVDDARK SVRDNLQATK YRVELFEQIQ MW