Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42834 |
Symbol | |
ID | 4838213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 133015 |
End bp | 133686 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389528 |
Product | predicted protein |
Protein accession | XP_001383308 |
Protein GI | 126133567 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0852302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACTACAGAAA ACATCTGGAA GCCTGACACT GCCGTTCCAG AACATATCCG TAAGCTCTTG GTACCTTCAG GTCCGAACCA CAGCGTTAAC TATATTCTTG CTTTTGTTCA GATAGTCAGA CTCTTGAAAA CCCAGAAGAG AACTGGTTGG GTTGACCGTG GAATTCCGGC AGAAAAAGTC GAAAGCATCA GTGACCACAT GTATCGGATG TCTATCATCT CGATGTTCAT ACCGAACGAG AACATTGACA TCAGTAAGTG TGTGAAAATC GCCTTGGTGC ACGACATTGC TGAATCGTTG GTAGGTGATA TCACTCCATT TGGAGGAGTC ACCAAGGCTG AAAAGCACCG TCGTGAATTG GAATCGATTC AGTACTTGTC TGAGATCATC AAGCCATACA ATGAAAGGTT CTCCAAAGAA ATCTTGGAGT TGTGGTTGGA CTACGAAGAA ATCAGGACCA TCGAAGCCAG GTACGTTAAG GACATAGACA AGTACGAGAT GATCCAACAG GCTTGGGACT ATGAACAGGA CTTCGGCCTC ACATATGATT TGAGTGAGTT CTATGATTCA AGAACCGCCA TAGTCTCGAA GGAAATCGGC GAGTTATGTG ACGAGGTCAT CAGACAGAGA AACGAACACA TCGAGGCATT GAAATCGAAA GCTTCCAGCT AG
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Protein sequence | TTENIWKPDT AVPEHIRKLL VPSGPNHSVN YILAFVQIVR LLKTQKRTGW VDRGIPAEKV ESISDHMYRM SIISMFIPNE NIDISKCVKI ALVHDIAESL VGDITPFGGV TKAEKHRREL ESIQYLSEII KPYNERFSKE ILELWLDYEE IRTIEARYVK DIDKYEMIQQ AWDYEQDFGL TYDLSEFYDS RTAIVSKEIG ELCDEVIRQR NEHIEALKSK ASS
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