Gene PICST_35725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35725 
SymbolOYE3.1 
ID4837881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1820218 
End bp1821486 
Gene Length1269 bp 
Protein Length422 aa 
Translation table12 
GC content40% 
IMG OID640389196 
ProductNADPH dehydrogenase (OYE31) 
Protein accessionXP_001383637 
Protein GI150864700 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTA CTGATAAAGT GCAATCATCC AACGCTGTTA CCTATTTCTC TCCTGAGCAA 
CCTGTTCCTG CTGGAACATA TTTCCAACAA GAGAAACAGA AAAAGCCTCT TCTATTTTCA
CCTTTGAAGA TCAGGGAATT GATCTTACAA AATCGTTTAG TTGTTTCCCC AATGTGTCAA
TACTCTGCTG GTAGAGATGG TCAGGCTACA CCTTACCATT TAGTTCACTA TGGCCAATTT
CTTCTTAGAG GCCCAGGCTT GACTTTTGTT GAAGATACCT CCGTCAGTCC CGAAGGTCGC
TTGTCTCCAG AGAATTTAGG AATTTGGAAT GACCAACAAG CAGAAGCTCT TAAAGACATA
GTTGATTTTG CCCATCTGCA AAAACAACTT ATTGGAATTC AACTTGACCA TGGTGGTAGA
AAAGCAAGCT CTCAACCTAA CTACATTCAT TTGGAACAGA ATGCAGAGGA ATCAGTAGGT
GGTTGGCCAA ATGAAATTGT TGCTCCCTCT CCAATTGTTT TCCGTCCCAA CGGAAATCTT
GTTAAGCCGA ATGAATTGTC GAAGTCCGAT ATTTCAAGAA TCGTTAATGA TTTTGGGAAT
GCTGCAGAAA GAGCAGTCAA GATTAGTGGC TTTGATGCCA TCGAAATCCA TGGGGCTCAC
GGCTATCTTA TCAATCAGTT TTACAGCAAG ATTTCTAACA AGAGAAAGGA TGAATATGGA
GGAAGCTTTG AAAACAGAAT TAGATTTCTT CTAGAAGTAG TCGATGAAGT TAGATCGAGA
ATTCCTAGCT CTATTCCATT GTTCTTGAGA ATTTCTGCTA TTGAAAATAC CGAAGATGAA
GACGCCTGGA CTTTACTGGA ATCAATAAAG TTGTCAACGA TTGTTGTCGA GCATGGTGTC
GATGTAATTG ATGTCTCTTC AGGTGGTAAT TGTCATAGAC AATACAGTAG AAAAAGTTTG
AGCAAAGGAC ATGCCCCTAT GCATATTCCA TTGGCAAAGG CGATTAAGGA CGAACTTGGA
GAAAAGGTGT TGGTTGCTTG TGTTGGTAGT TTGAATTCAG CAACTCTAAT TGAGGATGAA
TTAAAGAAAG GATCGTTTGA TATTGCTCTT GTAGGAAAAG GGTTTTTGAA TAACCCTGCC
TTGGTTTGGA AATTCGCAGA AGAGTTGGAA ATTCGTGTTC ACCGTCCTTT GCAGTATGGA
TATCCGTTTT TTCCACCAAT TCAGCAAATT TTGGAATTAA TTGCAAAATC GGAGGAAGCT
GAAACTTAG
 
Protein sequence
MSSTDKVQSS NAVTYFSPEQ PVPAGTYFQQ EKQKKPLLFS PLKIRELILQ NRLVVSPMCQ 
YSAGRDGQAT PYHLVHYGQF LLRGPGLTFV EDTSVSPEGR LSPENLGIWN DQQAEALKDI
VDFAHSQKQL IGIQLDHGGR KASSQPNYIH LEQNAEESVG GWPNEIVAPS PIVFRPNGNL
VKPNELSKSD ISRIVNDFGN AAERAVKISG FDAIEIHGAH GYLINQFYSK ISNKRKDEYG
GSFENRIRFL LEVVDEVRSR IPSSIPLFLR ISAIENTEDE DAWTLSESIK LSTIVVEHGV
DVIDVSSGGN CHRQYSRKSL SKGHAPMHIP LAKAIKDELG EKVLVACVGS LNSATLIEDE
LKKGSFDIAL VGKGFLNNPA LVWKFAEELE IRVHRPLQYG YPFFPPIQQI LELIAKSEEA
ET