| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35694 |
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| Symbol | DBP6 |
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| ID | 4837855 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1666833 |
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| End bp | 1668764 |
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| Gene Length | 1932 bp |
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| Protein Length | 591 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389170 |
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| Product | ATP-dependent RNA helicase DBP6 (DEAD-box protein 6) |
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| Protein accession | XP_001383606 |
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| Protein GI | 150864672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.788268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0369979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGAG CCAGATTCGA TCCCACGGCG TTAGAAGAAC CTACTGTTGT TTCTGTGACA
CAGAGGCGAA ATCTCGTACG AAAAAGACGG CTCAGTCAGA CTTCGTTAAG CAGCGATGAG
CATGATTTGC AACTGCTGAA GAACGAAATC GTCGAAGATA GTGACTCTCT GAGTGATGAC
CTGAGTGATG ACCTGAGCTC GGACGAAAGT GAAGAAGAAA GTGAAGAAGA AGAAAACGAA
AACGAAAACG TTGTGAACAA TGACGTAGCC AAGGATATTG ATTCTGTAGA AAGCGAAGAA
AGTGAAGATT CGGACCATTC CAATGATCCT AATGATGCTA TGGATGTTGA CTCAGAAGTA
AATACCGAAG TCGATGTGGA TTATGTCTCC AAATACAAAA GTGTTTTTGA CAAGTTCAAA
AAGTCTGTTC CTGAGACGAA GAAAATCGAT TCTGAGTCCA GTTCGGAAGA AGAAGATGAC
GTAGAAATGC AAGATTTGAT GCCTTTACCA CAGCCAGCAC TTCCCCGAGA CAAACGATTA
ATATCTTCCA ATTCACATCT TAAAAACTTA GACTGGTTAG CTACTCCCAT CTACGCTAGT
CCCGAAGATA GTAAACCATT TAGTGAATTC GAAATTTCTC CGTTTCTTCT CAAGAATCTT
GAACGAGACA ATTTTACCAC CGCATTTTCG GTCCAGATAG CCATTATGGA TATTCTCTTG
CATGATATCA AGCGGAACAG ATTGGAACCA GACGTTAAAG GAGATATTCT TGTCAATGCT
GCTACTGGTT CTGGTAAGAC TTTGGCGTAT CTGATTCCCA TTATTGAAGC TTTACATAAT
CGTGTTGTAC CGCGAGTACG AGCTATCGTC TTGGTCCCTA CAAAACCGTT AATAAACCAA
GTCAAAGCGA CTTTTGTACA GTTATCTAGA GGCACCAATC TTTCTGTTGT AAGTCTTAGA
AACGATGTCT CTATCAAGGA AGAAGGGATT AAAATTGTAA ATAGTCCTCC GGACATCATA
GTGTCTACTC CAGGGAGATT GGTGGAGCAT ATTTCTAATA AGAGCATTAA TCTTAATAGC
TTACAATTCT TGGTGATAGA TGAAGCTGAC CGGTTGTTGA ACCAATCGTT CCAGAACTGG
TGTCAAGTAT TGATTTCCAG CTTAGAAGGC GATGTAAATA TTGCTGAAGA GTGGAAAATC
ACTCCGCAAA AGTTAATTTT CTCAGCCACT CTTACCACGG ATTCTGGTAA GCTCTCGGCG
TTGAAATTTC AGAAGCCTCG TCTTGTAATT GTTAACGACA GAAAGCAACT CGTTAACGAA
ATATTTAATG TTCCTTCATC TCTTTCCGAG TACACCATCC AGTTTGGTAC AGCCAAGGCG
TCTATAAAGC CATTGATTTT GGCCAAGTAC TTGCTTGAGA ACAATAAGTT GTCGAACGTA
TTGATTTTTA CCAAGTCCAA CGAAGCTTCT ATCAGATTGT GCAAATTGTT AGAGTTGATG
TTTGGCAAGT TGCACCCAAG CATGAACATA GCCTATATCA ACTCTACCAA CAATAAGAGT
GCCATCCGTA CGAAGATCTT GAAGGATTTC TCAACCCAGA AGATCAACAT CTTGGTAGCT
ACAGATTTGA TTGCTCGTGG TATAGATATT CTATCTATTA CCGATGTGAT CAACTACGAC
TTGCCCAACT CATCCCGTGA GTATGTTCAT AGAGTTGGGC GTACAGCCAG AGCCAACCAG
ACTGGCCATG CTTACACTTT GTGTTTCGGT AAGGGAGAAG CTAAGTGGTT CAAGAAGATT
ATTCTGGATG TGGGTCGTGG TGACAAGACA ATTGAGAAGG TAGAGATTGA GCTCAAGGAG
CTTATCGTTG CGGAAGATGA AAATGTATAT AACGAATGTT TGGAATCCTT GCTGAAGCAG
GTATTCCACT AG
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| Protein sequence | MFGARFDPTA DDSSSDESEE ESEEEENENE NVVNNDVAKD IDSVESEESE DSDHSNDPND
AMDVDSEVNT EVDVDYVSKY KSVFDKFKKS VPETKKIDSE SSSEEEDDVE MQDLMPLPQP
ALPRDKRLIS SNSHLKNLDW LATPIYASPE DSKPFSEFEI SPFLLKNLER DNFTTAFSVQ
IAIMDILLHD IKRNRLEPDV KGDILVNAAT GSGKTLAYSI PIIEALHNRV VPRVRAIVLV
PTKPLINQVK ATFVQLSRGT NLSVVSLRND VSIKEEGIKI VNSPPDIIVS TPGRLVEHIS
NKSINLNSLQ FLVIDEADRL LNQSFQNWCQ VLISSLEGDV NIAEEWKITP QKLIFSATLT
TDSGKLSALK FQKPRLVIVN DRKQLVNEIF NVPSSLSEYT IQFGTAKASI KPLILAKYLL
ENNKLSNVLI FTKSNEASIR LCKLLELMFG KLHPSMNIAY INSTNNKSAI RTKILKDFST
QKINILVATD LIARGIDILS ITDVINYDLP NSSREYVHRV GRTARANQTG HAYTLCFGKG
EAKWFKKIIS DVGRGDKTIE KVEIELKELI VAEDENVYNE CLESLSKQVF H
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