Gene PICST_35437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35437 
Symbol 
ID4837983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp431225 
End bp432073 
Gene Length849 bp 
Protein Length282 aa 
Translation table12 
GC content41% 
IMG OID640389298 
Productpredicted protein 
Protein accessionXP_001383714 
Protein GI150864749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.779358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT CAGATATAAT TGAGATCAAG GCAAAGCTCT GGAACGGCCA TATCAACCTC 
CGTGTTGTTT TGGCCTACAA AGACCAGAAA GTCGAGTACT TGTGTACTAT TTATCGAAAT
TCGTACATAA CGCTAAAGTT GCCAGCTATT GTAGAGTACT TTCTGGCATT TGTACAGGGA
CTTCTGTCAA AACAGCTTTG GTTTGAATAC GAAGGAGTAC CCATAAAATG GAATCTTCCC
GTAGGGTTGC TTTATGACTA TTTGCATCTT CCTTCACTTC TCGGTAACTT TGAGTCTAGC
AGCTCTTGGA CAGTCTACTT GAGATACGAC GATTATCCAA GTGATTACAT CATCCCCTTT
ATCTATAAGA AAGACGATGG AACTGTTGAT TTCGACAGGT CATTGAAGGA AGTGATAGTC
AACCAACTTA AACAGTCCTG TTTCGTACTT AATGGCAATT CTAAACCTAT CATGAGCCTC
AGCGAAGCCA ACTCCATCCA GCTATGGGTG TCCATTGTGG ATCACAACTT GCTGGCATAC
ACCTCTATAA ACAAGAAAAT TGTACCAAAA GATAAGGCAC AGAAGATCCC GGTAAGAATA
TTCATTCCTG GAACTACAAC CATAGTCCAG GCACCTATCT ATCCGTATGG AGAGGAAGAG
CCAACTTCTA TGAGAGATGT GTTACTGCTA CATCTACCAC ATCTTTTTGC TGAAAGAGAA
GCAATCGCTT TACCTTACAT ACATGGGATA GATACCCAGT CGTTGCTTGA TGAGCCTTTG
TTAAAAACTT GGGAGATCTT CAAGCATTTA GACAATTTCC TCTATGTTGT GGTCATCCCA
AGAGTGTAA
 
Protein sequence
MADSDIIEIK AKLWNGHINL RVVLAYKDQK VEYLCTIYRN SYITLKLPAI VEYFSAFVQG 
LSSKQLWFEY EGVPIKWNLP VGLLYDYLHL PSLLGNFESS SSWTVYLRYD DYPSDYIIPF
IYKKDDGTVD FDRSLKEVIV NQLKQSCFVL NGNSKPIMSL SEANSIQLWV SIVDHNLSAY
TSINKKIVPK DKAQKIPVRI FIPGTTTIVQ APIYPYGEEE PTSMRDVLSL HLPHLFAERE
AIALPYIHGI DTQSLLDEPL LKTWEIFKHL DNFLYVVVIP RV