Gene PICST_35397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35397 
SymbolORT2 
ID4838167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp208465 
End bp209478 
Gene Length1014 bp 
Protein Length337 aa 
Translation table12 
GC content43% 
IMG OID640389482 
Productintegral membrane ornithine transporter of mitochondria 
Protein accessionXP_001383667 
Protein GI150864720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.2179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA AACGAGGTAT CCCTGCCATC ACGGGGGATA TAGACTACCA CACAGCATTC 
CACGTGTTTC CAGAAGCACT AATGCCATTT CGTGGTTCTA TACTAGCTTA TGGTTCTTCT
TTTCTTCTGA CATTTCTAGG CTTTCCACTA GACACAGTCA AGACAAGAAT GCAAACCCAT
AAACACTTCA CTTCGTACTG GGATTGTGTC AAGAAAACGT ACACGAGGGA AGGAGTCAAA
GGTTTCTTTC GTGGGATATG GGCCCCGCTA GTCCTGACCT CGTTCTCGAA ATCGTTCTCA
GTCACACTCT TCACTCTTGT CAAACCTCAT GTCTACCATT CAATATACTC ATTTAACGAC
TCTAACCCAG CACATCCATT TATTCGAAAT ATCCCCGTTT GTTTCGTATC AGGAACCATT
GCTGGTGGTG GTGTGTCTCT TTTTGCATGT CCTTTTGAAT TCACTAAGAT CTACGCTCAA
CTAGAGAAGT TGGTTCACAA CAAATCCTTG AAAGAACTTC CAGGAAACTT ACCAACACAG
AACCAAGAGA TGCGTAACAC CTCTACAGCC CAAATAGTGC GACAGATCAT CAAATACGAA
GGGGTAAGGG GACTATACTC TGGATTCAAG TACCATTTCC TCAGAGATTC GTTGTCTCTG
GGATTTTACT ACTCTATCTA CGAGTCCATG AAGTGGACCA TGAATAATCT CATCAACAAA
GACCCTTTGA AGTCGTCCCA GGTGTCTATT CTCATGGCAG GAGGGTTTTC AGGTGTGTTC
AGTTGGGCGC TAATCTTCCC GGTAGACACC ACCAAGTCCT TGATCCAGAA GGATGTGGTG
ACAAACATTT TACGTAAGGA ACAGGGCTTG GAACCTCTTC CTCCAAAGCA TAGAAAGCTC
CAGAAAATAG AAAGGAGATT ATACAGAGGT CTAGGTATCT CAATGTCTAG ATCTTTCCTT
GTTAACATGG TCTTTTTTAA CGCCTACGAG CTTTGTATGA GATATATTGC TTAG
 
Protein sequence
MSDKRGIPAI TGDIDYHTAF HVFPEALMPF RGSILAYGSS FLSTFLGFPL DTVKTRMQTH 
KHFTSYWDCV KKTYTREGVK GFFRGIWAPL VSTSFSKSFS VTLFTLVKPH VYHSIYSFND
SNPAHPFIRN IPVCFVSGTI AGGGVSLFAC PFEFTKIYAQ LEKLVHNKSL KELPGNLPTQ
NQEMRNTSTA QIVRQIIKYE GVRGLYSGFK YHFLRDSLSS GFYYSIYESM KWTMNNLINK
DPLKSSQVSI LMAGGFSGVF SWALIFPVDT TKSLIQKDVV TNILRKEQGL EPLPPKHRKL
QKIERRLYRG LGISMSRSFL VNMVFFNAYE LCMRYIA