| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35392 |
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| Symbol | RHO1 |
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| ID | 4837721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 176274 |
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| End bp | 176873 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640389036 |
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| Product | GTP-binding protein, rho subfamily |
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| Protein accession | XP_001383320 |
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| Protein GI | 126133591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0874099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGCTC CAGCTGAAAT CCGTAGAAAG TTGGTCATCG TCGGTGATGG TGCCTGTGGT
AAGACCTGTT TATTGATTGT CTTTTCCAAG GGGACTTTCC CAGAAGTATA CGTTCCTACT
GTGTTCGAGA ACTATGTTGC TGACGTCGAA GTTGACGGCA GAAGAGTCGA ATTGGCATTG
TGGGATACCG CTGGTCAAGA AGATTACGAC AGATTGAGAC CCTTGTCTTA TCCAGACTCG
AACGTCATTT TGATCTGTTT CTCAGTGGAT TCGCCAGACT CGCTCGAGAA CGTCTTGGAA
AAGTGGATTT CTGAAGTGTT GCATTTCTGC CAGGGAGTTC CTATCATCTT GGTTGCTTGT
AAGGCCGACT TGAGAAACGA CCCTGCAACT ATCGAAACCT TGAGACAACA ACAACAACAG
CCAGTTTCCA CTGCTGATGG TCAAGCAGTC GCCCAAAAGA TCTCCGCTAC CGATTACTTG
GAATGTTCAG CCAGAACTGG CCAAGGTGTC AGAGAAGTGT TCGAAGCTGC CACCAAGGCT
TCCTTGAGCA AGAAGGAAAG TCAGAAGAGT GGAAAGAAGA AGAAGTGTGT TGTTTTGTAA
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| Protein sequence | MPAPAEIRRK LVIVGDGACG KTCLLIVFSK GTFPEVYVPT VFENYVADVE VDGRRVELAL
WDTAGQEDYD RLRPLSYPDS NVILICFSVD SPDSLENVLE KWISEVLHFC QGVPIILVAC
KADLRNDPAT IETLRQQQQQ PVSTADGQAV AQKISATDYL ECSARTGQGV REVFEAATKA
SLSKKESQKS GKKKKCVVL
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