| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35358 |
|---|
| Symbol | ACD2 |
|---|
| ID | 4838319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | - |
|---|
| Start bp | 26055 |
|---|
| End bp | 27131 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640389634 |
|---|
| Product | putative esterase |
|---|
| Protein accession | XP_001383645 |
|---|
| Protein GI | 150864706 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGGT CCAAATATTA CGAACTTCAA GCCGATTACT CTTTCACTGG AGGAGTACCA
GAAACTCCAT ATGAATTGAA TGAAGATATA AAGGATAAAT TTGATGAAGA ATATGTTTCC
TTCTTCGACA AAAATATGAA GGAAGCTTCA AACTTTCTCT ATACTCATAG GGTTCCATTG
GCTGTGATCA GAAAAGGTGG CAACATTATG CCGGGTCAGA GTCCTTTGCT GAAGATGGCT
AAAACCTTTG ATATCCTGAT CGCTAGAAAA CACACAGAAG GTTCCATGCC GGTTCCAGCC
AGAGTGTTCG TTCCGGAAGG TGATCGGCCA GCTGAGGGCT GGCCCTTATT TATTTGGTTC
CATGGAGGAG GATGGGTGTT GGGAAACATT GACACTGAAA ATTCTTTCTG TACTAAAGTT
GCATCATTGT CGAAGTGTGT AGTGATGTCT GTCGACTATA GATTAGCACC AGAAGACCCT
TTTCCAGCGG CCGTTCATGA CGCTTTTGAA TCGGTGTTGT ACGGTTTCCA ATCATCCCCT
ACTGATTTGG GAATCAACAA TAGGAAGATT GCTATTGGTG GCTCATCTGC TGGAGGCAAT
CTAACAGCAG TAGTTACTCA CAAGTATGCC AGTTCGAAAT TTGCAGAGCT GTTACCTCCT
ATTTTGTTTC AAGTTTTGGT GGTTCCTGTT ACTGATAATA CTGCTACTCC TGAAAACAAG
GAGTCATGGA AGCAGTTTCA GTTGAGTCCT CAATTACCAG CAGAGAAGAT GATCTGGTAC
AGATATCTAT ACTTACCAAA TGAAAAAGAC ATCGTGAAAC CAGAATCTTC TCCATTGTTC
TACTCCGATG AAAGCTTCAA GAAGGTGCCA CCATGTTTTA TTGCGGCAGC AGAATGTGAC
GTTTTGAGAT CTGAGGCTGT CGAATATCAT GAAAAATTGC GCAAGAACGG AGTCAAGTCT
GAAATTAAAA TTTATACTGG TGTCCCTCAT CCAGTCATGG CCATGGACGC TGTATTGCAG
AAAGGTAGAG ATCTAATTAA AGATACAACT GATGCGCTAA GAAAAGTATT CTATTAA
|
|---|
| Protein sequence | MTRSKYYELQ ADYSFTGGVP ETPYELNEDI KDKFDEEYVS FFDKNMKEAS NFLYTHRVPL
AVIRKGGNIM PGQSPLSKMA KTFDISIARK HTEGSMPVPA RVFVPEGDRP AEGWPLFIWF
HGGGWVLGNI DTENSFCTKV ASLSKCVVMS VDYRLAPEDP FPAAVHDAFE SVLYGFQSSP
TDLGINNRKI AIGGSSAGGN LTAVVTHKYA SSKFAESLPP ILFQVLVVPV TDNTATPENK
ESWKQFQLSP QLPAEKMIWY RYLYLPNEKD IVKPESSPLF YSDESFKKVP PCFIAAAECD
VLRSEAVEYH EKLRKNGVKS EIKIYTGVPH PVMAMDAVLQ KGRDLIKDTT DALRKVFY
|
|---|
| |