| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31127 |
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| Symbol | HOL41 |
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| ID | 4837772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1832831 |
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| End bp | 1834300 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389087 |
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| Product | major facilitator superfamily multidrug-resistance protein |
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| Protein accession | XP_001383641 |
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| Protein GI | 150864702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTGG TTAGCGATAT TGAAAAGCAC TCTCAGAACC ATATCGAAAC TGTTCTGGAT
GAAAATTTGT CAGAACTTTC TCGTGAACAT ATTGATTATC TTATGCAAAG ACATGGGACA
GTTGACTTAG ATCCTCTACC TTCTATGGAC CCAGAAGATC CACTCAACTG GCCCACTTGG
AGAAAGAACT ACGAAATTTT GATTATCGCC TTCCAATGTT TTTTGGGTAA TTATTTTTCT
GCGTCTCTTA CTCCCGCTTA TGAAGATATG GCTGTACAGT ATGGTGTTGA TGTTCCAACA
TCTTCTTACT TAACTTCTGC TCAAATTGCT GTTGTTGGTG TTTTGCCATT TTTTTGGGTT
CCTATTATGA ATACTTACGG AAGAAGGTCC ATTCTCATGT ATACTGCTTT TTGTGCTATT
GGCATAAATA TTGCTGGTGC TTATGTCAAA ACCTACGGTC AACAAATGGC TACAAGATGT
TTGTATGCTT TTTGTGCTGC TACAGCATCT GCTTTGGGTA GCGCAGTGGT TTCTGACTTG
TCTTTTAGTC ACGAAAGAGG TATGAAAAAT GGTTGGTGGT CTCTTGGTTT TGTTCTTGGT
ACTCCATCTG GTCCCTTTAT CTCCGGTTTC ATAATGCAAT ACTCTACTAA GAAATGGATC
TTCTTCATGT TCGCTATATT CAACGCAATT CAAGTTGTGT TGTTTTTCTT CTCAAAGGAA
ACGGTCTACA ACAGAGGCGA TAAATTAGAA GAACCAAGCG GTATAATCAA ATTGATTGGG
ATTTACAGAC GTAATAACAA TAAGGTCACT TTAGGATCTT TTATTCTGCC ATTAAAGCAG
GGCTTAAACT GGAGAATAGG TACTATTGTT ATTGCTCTCA GTGTTACTTT TGCGTACGCC
AATATTGTTC TCATCGTTGA AATGCCACAA ACTTTTGGTA CTATATTCGA ACTCAGTCCG
CAAGCACTAG GTTTACACTA CATTGCTCTT ATTCTTGGTT CCGTCATAGG TGAAGCGCTT
GCTGGTTCTC TTTCCGATTG GTGGATGGCT AAAAGTATCA AAAGACGAGG AGGAAAGAGA
ATCATTGCTG ACCGTTTGTA TGTCTCTTAC AATGGATTCT TGTTGGTCAT CATTGGTTTG
GTTGTCTGGG GTGTTTATTT GGACAGAGCT AGGCCTGATC ACTGGAGTAT TAGTGCATTG
ATTGGAGCAG CCATTATGGC AGTTGGAAAC AACATTGTTG CAACAGTCTT AATTACTTAT
TCGATTGATT GTAATCCTGC ATATGCTTCT GATATTGGTT TATTTATTAC CATTGTAAGA
CAAGTCTATG GTTTTGTTGC TCCATTCTAC TTTCCAAGCA TGTTTACCAA TTTGGGCTTC
ATTGGTTCCG CTGGTTTGAT GATTGGCCTT GTATTCGTCT TCGGTACGAT TGTTACCTCG
TTCGTCCACT TCATGAGTAG AAAGGTTTAG
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| Protein sequence | MSLVSDIEKH SQNHIETVSD ENLSELSREH IDYLMQRHGT VDLDPLPSMD PEDPLNWPTW
RKNYEILIIA FQCFLGNYFS ASLTPAYEDM AVQYGVDVPT SSYLTSAQIA VVGVLPFFWV
PIMNTYGRRS ILMYTAFCAI GINIAGAYVK TYGQQMATRC LYAFCAATAS ALGSAVVSDL
SFSHERGMKN GWWSLGFVLG TPSGPFISGF IMQYSTKKWI FFMFAIFNAI QVVLFFFSKE
TVYNRGDKLE EPSGIIKLIG IYRRNNNKVT LGSFISPLKQ GLNWRIGTIV IALSVTFAYA
NIVLIVEMPQ TFGTIFELSP QALGLHYIAL ILGSVIGEAL AGSLSDWWMA KSIKRRGGKR
IIADRLYVSY NGFLLVIIGL VVWGVYLDRA RPDHWSISAL IGAAIMAVGN NIVATVLITY
SIDCNPAYAS DIGLFITIVR QVYGFVAPFY FPSMFTNLGF IGSAGLMIGL VFVFGTIVTS
FVHFMSRKV
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