Gene PICST_31034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31034 
SymbolDAL10 
ID4838215 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1571882 
End bp1576145 
Gene Length4264 bp 
Protein Length480 aa 
Translation table12 
GC content38% 
IMG OID640389530 
Productputative allantoate permease 
Protein accessionXP_001383924 
Protein GI150864915 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.242989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.204627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCATT CAAAGCTGAA GATGGTTCTG AAATAATCTT GAGGATATAT AGACCGAATG 
ATAGCAAGAA AGATGAATTA TTACCAGTCC ATATTGATTT CCACGGTGGT GGTTGGGGTT
TAGGGGATTT GGATACTGAA TCGCATGTTT TGAAACATTA CTGTGCTAAG GCAAGAATTG
CCATTGTTGA TGTTGATTAT AGATTGATCC CAGAATACGC TTTTCCCACT GGTTTGACTG
ACTGTTTCGA AGCTACTAAA TATGTCCATC AAAATGCCGA AAAGTTAGGA TTCAACAAAG
ATAGTATTTC TATCGGTGGC GTTAGTGCTG GAGGTAATAT CTGTTTAGCA GTTGATCACT
TATGCAGAGA CATTGGCCTC AAGTTGAAAT TGGTTTGTGC CGGTACACCA CAAGTTGATG
ATATCCAATC ATACGCAACT GCTGCAGACT CTCCATACTT CTCAACCCAA GAATGTGAAT
TTGCTCCAAC ATTGAATTGG GCAAGATTGA AATGGTTCGA TTCGTTGAAA TGGTCCTCAT
TATCTAAAGA TCAGGGTGAG TACGACCTTC AAGTTGCAAA GATGGGCTGG TTCAAGAGTA
TCATGACCGC GCCGAACTGG AAAGGTTTGT CTAAAACTGT CATTTATACA GCAGGGTGTG
ACCCAATGAG AGATGAAGGT GAAGCCTACG CTCAAAAGTT AATTACTAAT GGTAATGAGG
TTGTGTTCAA GAGATTTGAG GGTGTACCTC ATCCCTTTAT GCATATGGAT GCTGCTTTGT
GGCAAGCTAG CTCTTTTATT GACTTGACTG CTAAAGAATT AGCATTGGCT CATGGTACTA
TAGGATGGTA AATTCAACAG TTACTTCAGA CATAGACATA TGTATTCATA CACATTTCCT
CTTGTATAAC CCGAAAGTGT AATCCAGATG TGTTATGCAA ACGAAACACT TCGTGAAATA
GAATTACTTC ACATTATTTT CATAAAAATG GACGGTGTAT ATTTTTAGAG TTTACAGTTG
ATATTGAAAA GTTTAAAAAG TAAAGTTCAA GCATTACAGA TAATAGTCGC CGACAAGAAA
CAACAGTTAG TTAAAAATAC TTCAAGTGCA TAAAATATGT TTATATTAGG TTTGAGTATA
CTCAAAAAGT TGCAAAGCCA AATCTAAAAC AGCGTCCTCA AATCTTCCAA AATGAACACC
TAGAACTTTG ATGGCCTTCG TTGAATCGGT AGTAAAGTGA GAACCGGTAA TTCTCCTACC
TGGTTCACCA ATAGGAATAT TATCAGCCAA CTTCTTTGGT AACTTCTCTC TAAGTATATC
TGCAATTTCT TGATTGCAGA AATCACCAGC ACTAACCATA AATCTTTGAT TTGAAGCGCC
AGGAGTAATT AGGGCTTTAA TATGGGCGTT TGCTAAATCT CTAACATCAA CCCAAACAGG
ACCCTTTGTA GGTGGAACTT CATCCAAGGA ACTTGAAGTA CACATCTTCC AAATGCCTTG
ATTGCTAAAA TTCAAAGATG CAATTGAATC TAGCAATAAA GTATTCATCA ACGGGCCATA
GACCATAGGT GGACATAAAA CAGCAATATC AAAGTTTGGA TGTTTTTCTT CGATGAAATC
CCAAGCTGCT CTTTCAGCGA CAATTTTGGA TGCTCGATAG GCAACTGCAA CGTCACTGGT
ATTAGCTCCA TCATCCCATA ATAAGGGAGA GAAATCTCTT TCTGTCAATA CCACCCCTGG
TTGCATACCT TTTGAAGCAT CGAAAACTGC AGCAAAAGAC GAAGTAATGA CAACTCTTTT
GACTTTTGGT TCGTTGATAG CAGCTTCCAT AACTGTCGTT GTTCCCTTAA CTGCTGGTGT
TAACAACTCA TCAACAAAGT TGGTAACTGC ATATGTATAT GGTGAAGCCA AATGAAGAAT
ACCATCACAA CCAACAACAG CTTTTTGCAT TGATTTCAAG TCTGTGATAT CACTGATAAA
AGCAAACGAT AAGGATAATT GATACTTTCT TTCAACGCTT CGCATCAATC TATCAGCTTT
TGACTTGGAT CTTAAAGCGG CTCTAACTTT ATATCCTTCC TGCAATAATT GTTTAACACA
GTGTGCTCCA ATGAAACCAG TTGAACCAGT AACGAGTATC AATGACCCAG GGTAAATAAT
TGGCTCAGCA GTCATTTTAA TGAATCTAGA TGAATAATGA AGTTTTGGAA AAATCGCAAT
ACAAACTCTT TTAAGAGAAA ACAAAAAGGG ATATTAAGCT CTCAAAAATG AGACAAATGC
CCAATATATT TGAATTTCAT CTTTATGTAC AGCCATACGT TCAAGGAATT AAGGTCGTTT
CAGCAAATAA TTGGAAGCCA ACAATTGCCA AATGGGAAAT ATGAAGTTCT AGCAACTGTA
GTTCCGGAAA CGAAAATATG CCGCAATCTG AATTTTCGCA TCTTCCTGAA AAGTCTCCGT
GGGGCGCAAA TTTGAAGTGC CGATAACGAT CTTCTGCAGA TTACGACTAT CATCTAAAGT
TGGTTTCCTT AACCATATTG CTGATATCGG CATCTGTTAC CAAATCATAT ATATAGATAT
AGATATAAAT TCCTTCTTTT TCGATGTTCA TCTACGTTCT CTACTGCCTC GATTCGTTTT
ACATCTAACA GATATCGAGC AAATTATATA TTTTCAATCA CCGTCTCTAC GTCCCGCTAA
TAATAAGTAA GAAACGTAAC TAAAAAGAAT CATGAGCTCA GTTGAAAAAA GCTCGTTGGC
TGCTATTAGC GTTACCCAAG TGGGATCGAC AACAGACTTC GGCAATTGTG ATACACACGA
TCGACTGGTA TACGAATTTT TGAAGAATTT TGATGACGAA AATCCAGAAG AAGCTGTCTC
AGCGGAGGCA GTTACCAGAA AGGTTGATTA TCGTATTATG GGAATTATGT TGACATGCTA
CTTCTTGCAG TTTCTAGACA AAGTTGCTTT GAATTATAGT AACGTTATGG GTATGTCACA
AGATATTGGT TTGGTCAACA ACCAATTCTC ATATTTGGCT ACTTTCTTCT TCGTTGCATT
CTTTTTCTTT GAACCTGTTC AAGGCTTCTT TTTGCAAAAA TTTTCTCCTT CGAAGGTTTT
GGGTTTAAAT GTCTTGCTTT GGGGTGTCTT TTCTGCATGT TGTGCTGCTC CAACAAACTT
TGGTGGTATG TTGACTGTAC GTATTTTACT CGGCTGTGCA GAAGCTGCCA TCAGTCCCTG
TTTGTTACTT ATTACAACAA TGTGGTACAC TTCATATGAA GGTTCGTTTA GAAGTGGTAT
CTGGTATTGT GGTTTGGGTT TGGGTCAAAT ATTTGGTGGA TTGATCTCAT ACCTATTCCA
ATTGGTTTCT AATACTTCCA TTCGTGGATG GAGAATAATG TTTATTGTCA TTGGTATGCT
CAATATCGCC GCCGGTTTAG CAGCATATTT TACTTTGCCA GACAATCCAT TATCCTGCAA
ATTTTTAACG CCAAAGGAAA AGTATGTGTT GTTGACGAAG TTGACGGAAA GTAAAGTTGG
TATTCAAAAT AAACGCTTAG TCAAGTCTCA ATTTTGGGAA TTGTTGTGTG ATATTCAACC
TTGGTTATTA TGTCTTTTGG CTATCACGGT TTCATTTTCG TCAAGTACAA TCTCAACTTT
TTCATCGACA GACATTATTT CGTTTGGTTT CACATCAAGG GAAGCTGCTC TATTGAATAT
GCCATCTGGT ATTGTATCCA TTTTCTCAAC ATTGGTGTCT ACATATTTCG TTATGAAGGG
ATTTCCACGC TGGATTGCCA ATACTCTTTT ACTTATTCCT GCTATCATTG GTGGTGCTTT
GATGTCATTT TTGCCAAAGT CCAATCAAGC TGGCTTGTTG GTTGGTATCT ACCTTATTAA
TTTCATTGTT GCCCCTTTGG CTATCATATA TAGTTGGGTC GGAGCCAACT TTTCTGGTTA
TACAAAGAAG ATTGGTGCGA ACCTTTTTAT CATGTTTGGT TTTGCCATTG GTAATATTGT
TGGTCCTCAG AGTTATCAAC ACAAGGATGC CCCAGACTAT TACCCTGCCA AAATCTGCTT
GTTGGTTACT CAAGCCTTGA GTATAATTAT AACATGGGTT ATAGCTTTCA TCTACTATCG
CAGAAACAAG AGTAGAGACG AAGAGCAGAA GGATGAATTA CCTTTGACTG AAGATGAAGA
ATTGAAACTC GCATGGTCCA ATTTGACGGA TTTTGAAAAC AGACACTTCA GATACAAGTA
TTAG
 
Protein sequence
MLHSKSKMNF DDENPEEAVS AEAVTRKVDY RIMGIMLTCY FLQFLDKVAL NYSNVMGMSQ 
DIGLVNNQFS YLATFFFVAF FFFEPVQGFF LQKFSPSKVL GLNVLLWGVF SACCAAPTNF
GGMLTVRILL GCAEAAISPC LLLITTMWYT SYEGSFRSGI WYCGLGLGQI FGGLISYLFQ
LVSNTSIRGW RIMFIVIGML NIAAGLAAYF TLPDNPLSCK FLTPKEKYVL LTKLTESKVG
IQNKRLVKSQ FWELLCDIQP WLLCLLAITV SFSSSTISTF SSTDIISFGF TSREAALLNM
PSGIVSIFST LVSTYFVMKG FPRWIANTLL LIPAIIGGAL MSFLPKSNQA GLLVGIYLIN
FIVAPLAIIY SWVGANFSGY TKKIGANLFI MFGFAIGNIV GPQSYQHKDA PDYYPAKICL
LVTQALSIII TWVIAFIYYR RNKSRDEEQK DELPLTEDEE LKLAWSNLTD FENRHFRYKY