Gene PICST_31025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31025 
Symbol 
ID4837943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1549316 
End bp1550323 
Gene Length1008 bp 
Protein Length335 aa 
Translation table12 
GC content43% 
IMG OID640389258 
Productpredicted protein 
Protein accessionXP_001383916 
Protein GI150864910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000912202 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0161556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTCT TAACTCTCTG GTTGTTCCTC TCAGAAACTG TCTCTGCACT TCCACTTCAA 
TGTGGTGCCA ACAACAGCCT GAGCTCTCTT GTCTCTTTCG AAACTGAATG TGTGGTAAGC
TCAGAACTAA TAACCTACTC AAATGATGCT TCCGAAGACG GAGATCTGGA CGGTCCACTC
CCTCACTTCG GAATTAATGA AACAACTACC AAAGATTCAT CTTACCGTGT TCACAAATTT
GACGATGGTT CCACTGTTAG CACTAGAAGG TTCGCATCTG AAAATGACTT GTTCAAGTCT
GAATTCTGGA AGAAACTCCA GAAAGGAAAG GATCCGGCAA CCGCAATGAC TACAGCCATT
TACATAGAGG ATACTGGCGC TACACTCTAC TTTGGACCTT CTGAATACAG AGACGACTTG
GAAAAGAGAA ACCCCTGGCG AAAGCCCAAG TCCAGGGAAG TTGAAATGTT GGAAGTTCAA
TTTGGGGACA AGAAGAAAGC CCACGTAACT GATATTCCCG TTAGCTGGTG CGTTTCTTCC
AAACTTTCTT CTAGTGGAGC TTCTTATACT CAAAGCTATA AGTGGACTAA GGCTATTACC
GTCAGTATAG ACATTCACAC ATCTGTAAAT GTATACACTG CCGGAGCTGG TGTCAGTGCT
GGTAATGATG ATTTGTCGAT TAGTCTTTCC AACACAGGAA GTATCACTTG TAACGCAGCT
CCAGGAAAGA AGGTTCAAGT ATTTGGATCT TTTGCTTATG CCTTCTTTCC GTTTGCAAAG
AAAAGAAGTG TGATCTTTTC CAAAAGTAGA GTATCCAATG GCCCCTGGGC TAAAGTGGTT
CATGGAAATC CTCGTTTGAA ATCCTTTGGG GCTATCTTCT TCGATTTATC CAGTGGTCCC
CCTAACTATT TTTGTGTTGA TGACCCTAAT AAGTTGAGTT GTGATGAAGG TAGTATTGTG
AACAACAAGT TTTCTGATCC TGCTGAAGGA CTACTACACG TTGATTAA
 
Protein sequence
MLFLTLWLFL SETVSALPLQ CGANNSSSSL VSFETECVVS SELITYSNDA SEDGDSDGPL 
PHFGINETTT KDSSYRVHKF DDGSTVSTRR FASENDLFKS EFWKKLQKGK DPATAMTTAI
YIEDTGATLY FGPSEYRDDL EKRNPWRKPK SREVEMLEVQ FGDKKKAHVT DIPVSWCVSS
KLSSSGASYT QSYKWTKAIT VSIDIHTSVN VYTAGAGVSA GNDDLSISLS NTGSITCNAA
PGKKVQVFGS FAYAFFPFAK KRSVIFSKSR VSNGPWAKVV HGNPRLKSFG AIFFDLSSGP
PNYFCVDDPN KLSCDEGSIV NNKFSDPAEG LLHVD