Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31025 |
Symbol | |
ID | 4837943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1549316 |
End bp | 1550323 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389258 |
Product | predicted protein |
Protein accession | XP_001383916 |
Protein GI | 150864910 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000912202 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0161556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTTTCT TAACTCTCTG GTTGTTCCTC TCAGAAACTG TCTCTGCACT TCCACTTCAA TGTGGTGCCA ACAACAGCCT GAGCTCTCTT GTCTCTTTCG AAACTGAATG TGTGGTAAGC TCAGAACTAA TAACCTACTC AAATGATGCT TCCGAAGACG GAGATCTGGA CGGTCCACTC CCTCACTTCG GAATTAATGA AACAACTACC AAAGATTCAT CTTACCGTGT TCACAAATTT GACGATGGTT CCACTGTTAG CACTAGAAGG TTCGCATCTG AAAATGACTT GTTCAAGTCT GAATTCTGGA AGAAACTCCA GAAAGGAAAG GATCCGGCAA CCGCAATGAC TACAGCCATT TACATAGAGG ATACTGGCGC TACACTCTAC TTTGGACCTT CTGAATACAG AGACGACTTG GAAAAGAGAA ACCCCTGGCG AAAGCCCAAG TCCAGGGAAG TTGAAATGTT GGAAGTTCAA TTTGGGGACA AGAAGAAAGC CCACGTAACT GATATTCCCG TTAGCTGGTG CGTTTCTTCC AAACTTTCTT CTAGTGGAGC TTCTTATACT CAAAGCTATA AGTGGACTAA GGCTATTACC GTCAGTATAG ACATTCACAC ATCTGTAAAT GTATACACTG CCGGAGCTGG TGTCAGTGCT GGTAATGATG ATTTGTCGAT TAGTCTTTCC AACACAGGAA GTATCACTTG TAACGCAGCT CCAGGAAAGA AGGTTCAAGT ATTTGGATCT TTTGCTTATG CCTTCTTTCC GTTTGCAAAG AAAAGAAGTG TGATCTTTTC CAAAAGTAGA GTATCCAATG GCCCCTGGGC TAAAGTGGTT CATGGAAATC CTCGTTTGAA ATCCTTTGGG GCTATCTTCT TCGATTTATC CAGTGGTCCC CCTAACTATT TTTGTGTTGA TGACCCTAAT AAGTTGAGTT GTGATGAAGG TAGTATTGTG AACAACAAGT TTTCTGATCC TGCTGAAGGA CTACTACACG TTGATTAA
|
Protein sequence | MLFLTLWLFL SETVSALPLQ CGANNSSSSL VSFETECVVS SELITYSNDA SEDGDSDGPL PHFGINETTT KDSSYRVHKF DDGSTVSTRR FASENDLFKS EFWKKLQKGK DPATAMTTAI YIEDTGATLY FGPSEYRDDL EKRNPWRKPK SREVEMLEVQ FGDKKKAHVT DIPVSWCVSS KLSSSGASYT QSYKWTKAIT VSIDIHTSVN VYTAGAGVSA GNDDLSISLS NTGSITCNAA PGKKVQVFGS FAYAFFPFAK KRSVIFSKSR VSNGPWAKVV HGNPRLKSFG AIFFDLSSGP PNYFCVDDPN KLSCDEGSIV NNKFSDPAEG LLHVD
|
| |