Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31021 |
Symbol | RHC18 |
ID | 4837941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1541465 |
End bp | 1544656 |
Gene Length | 3192 bp |
Protein Length | 1063 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389256 |
Product | Protein involved in recombination repair |
Protein accession | XP_001383583 |
Protein GI | 150864658 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.109982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA ATGGGCCTGA TTCTGAAGAG GAAAGCTCAG ATTCAGATAG TGAATCTGAA TCGTCATCTT CTGATTCTGA CGACGATGAA ATCACAGATG CATCCCCGGC TAAAGCAGGC GTTATCGAGC GAATCTCGCT AAAGAATTTC ATGTGTCACG ATTCGTTTGA ACTCGAGCTT GGGCCCCAAA TCAACTTTAT CATTGGAAGA AATGGGTCAG GAAAAAGTGC CATTTTGACC GGAATATCTG TCGGACTAGG AGCAAAAGCT TCCGACACTA ATCGTGGGAC GTCCATCAAG TCGTTTATTA AAGACGGGAA ATCAACAGCG AGAGTCACGA TAGTATTTTT GAATGAGGGC CCCGAAGCAT ATAGACCCGA GGAATTCGGC AAGAGGATTA TTATAGAGAG GAAGCTCCAG CGAATTGGAG GAAATACCTA CGCCATCAGA TCGCATTCTG GTAGGACGAT TTCGACCAAG AAAGCCACTC TAGACGAAAT CTTGTACAAA TTCAGCATCA CTATAGACAA CCCCTTAGCA TTTTTGTCAC AAGATAAGGC TCGTGAATTT TTGATGAACA CTTCAGACGA GCAGAAATAC AGTCTTTTCA TGTCCGGAGC ATTTATTACG AACATTATAG ACAATTTTGG CAGAACACTG AAGAACATAG CTGAAATCAA TTCCAAAATT GTGCAAGCAC AACATTATAG AAAGGCATGT AAAGATAGCT ACAACGAGAT TGCCAGCATA TACAACCGAC ACAAGAAGTC TGATTACTTG AGAAACAAAC TTCAGATGCT TTATGGGAAA ATCCTCTGGT ATAATGTGAC TACAATAGAG AAAAAGGTAA ATTCATACGA GGAACAAGCT ATTTCTTTAA AAGAAGAAAT CAAATCTGCA GACGATAAGA TTGTTGAATG CAACGAATTT ATAGAGAATG CACCAGAAGA GATAGCTGTG TTGGAGAAAG ACCTTACAGA TAAGGAGTTA TCTCTAGATG ACTTACTGGA GAAGCATTCC AAGACCAACG ACACCAGGCA AGATGCAAAG AATACAAGTA GCCAATTGTT GGAGGAGTGT AAGGAAAATG CAAAAGTGAT CCAGTCTTTG CAAGAAAAGA TAGAGACAAG AACCAAAGAT ATCGAGAAAG AGCAACGAAA GATTGACGAA ATAAATGGGG GATCAAGAGA AAAGCTAAGA CTAGAATATG ATGAATTGAG TGCAGAAATA CAAAATATCG AAGAGCAACT AACTGGGATA AAAAGAACTA TTGAAATTAC GAAGTCTTCT GCAAACCCTA ATATGGACAG TCACAAGTCC ACACTTAAAG ATCGTATGTC TCAACTAGAA TCTCTTCAAA AGAGAAGGCA AGATTCCCAA CGGGCCCAGA AGGACAGGTA TTTTGCATGG GGCAGGGAAA TGAGCAATGT AATACAAAGA ATTCGAAGTA CGAATACCTG GCACAAACTA CCAATTGGAC CATTGGGAGC CGATGTAGAA GTGAAATCAG AATACAGCAA GTGGAGCGCT TTGATAAACA CAGTTCTTAA TAGAATGCTC GACTCGTTCA TAGTCTGCGA TGAGCACGAC AGAAGACTAT TGGAAAGTAT ACTAGCGCAT TATTCGATGA AAAAAACCAT TATTGTCAGG AAGTTTGAAA GTTTTGACTT TTCCAATGGT AAGGTGTCTG GACATCCTAC TTTTGTAGAT ATGATAACAT GCAAGAATGA AGAAGTATTG CGAGCATTGG TTGATAGTAT GAATATCGAG AAACTTGTCA TCAGTGATAA AAATGAAAGC CCATCGTCAA TTCTTAACGA AAGAAACGTA ATGAGTGTTT TCACACTATC AACTGTCAAT TCTGGTACTC GGTACGGTAA AGCAGGAGAT ACTATTCGAA TGGATCCTGT TTACTATTCC AAGGACATTG TAAAATTAGC TGTTACAGGA GCTGATGAAC TTCATGATGT AGTTAGCTTA ATCTCGGAGG AAAAGCTTCA GATCGACATA CTACAGAAAA GACTTCGAGA GATGCAATCC CATCATCAGA ATGAAATCGT TAATCTTGAA AAGAAAAAGA ATGAATTCAA CGAAGTTATC AGAAGAAAGA AGCGGAAATT GGACGAAATA GAATCTAAGA TTAATGAAGA AGGTGATCTT TCCAACATCG AGAAATACAA AAGTGAAATT GAAGCACACA AAGACCAAAT CAAAACTAGG GAGGGGGTTA TAGAGGCGCT TACGGAAGAC TTGGAGTCCC GAAACGAAAT CTTGAAGAAA CTAAAGGAAA GTGTTAAAGA GCTTAAAGTT CAGTTAACCG AAGCTACAGC AGCTAGAGAT AGAGCAAAGA AGAACTTGCA TGATTATGAG GTTGAACTTT CTACAAACAA AGATAATAGA GTGAGTTATT TGTCCGAAAA GAAAAAAATC GAGACCCAAT TGGAAAAGAC AAATGCTAAA ATAGAAGAAG GAAACAACAA ACTCCAACAG TTGATTGATG AGGCAGAGAA GAAATGCAGA AGAGAGGAAG TGACGATCAC TTCCAATGAC ACGCAAGATT CCATTCGTGA TGAATATGCT CTAGTACAAA CACAAGTCAA AGAAGCAGAG AAACAGATTG GCAAACCATT CGAGGAGATC CAGAATGATT TGATCGAAGC AAAAGAAAGG CAGAGATTAG CAGAGGAAAG TTTAAAAAAC TTGTCCAGGA CTTATAAGAG CTTGGATTCG GATTTGAAAA TCAGATTTAA TTTCGTTCAT ACCACTATAT TGTCAAGTGT CGAACAGGCT TCCAGAACCT TCGAAAACTG TATGGCTCTT AGAGGGTTTA AAGGCTCACT TAGTTTTGAC CATGGAGAGA GAAAATTGAC TCTTCTTGCC CAAACGAAAA GCGACGACAA ACAACGTGAA GTGACCTCGT TGTCCGGAGG TGAGAAATCG TTTGCCCAAA TCTCGTTGTT GTTGTCAATT TGGAAGGTTA TGGATTCCAA GATTCGGGGA TTAGACGAAT TCGATGTCTT TATGGATTCC GTGAACAGGT CCATCAGTAT CAAACTCTTG TTGAACGAAC TTAGACAGTA TCCGAAGTCT CAGAACATCT TTATTACACC TCAGGATATT GCCGTTGTTG GTGATTTGAA TAGTAGTGAT GTAAAGATTC ATAAGATGTC TGATCCGAGA AAAGACACTT GA
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Protein sequence | MTQNGPDSEE ESSDSDSESE SSSSDSDDDE ITDASPAKAG VIERISLKNF MCHDSFELEL GPQINFIIGR NGSGKSAILT GISVGLGAKA SDTNRGTSIK SFIKDGKSTA RVTIVFLNEG PEAYRPEEFG KRIIIERKLQ RIGGNTYAIR SHSGRTISTK KATLDEILYK FSITIDNPLA FLSQDKAREF LMNTSDEQKY SLFMSGAFIT NIIDNFGRTS KNIAEINSKI VQAQHYRKAC KDSYNEIASI YNRHKKSDYL RNKLQMLYGK ILWYNVTTIE KKVNSYEEQA ISLKEEIKSA DDKIVECNEF IENAPEEIAV LEKDLTDKEL SLDDLSEKHS KTNDTRQDAK NTSSQLLEEC KENAKVIQSL QEKIETRTKD IEKEQRKIDE INGGSREKLR LEYDELSAEI QNIEEQLTGI KRTIEITKSS ANPNMDSHKS TLKDRMSQLE SLQKRRQDSQ RAQKDRYFAW GREMSNVIQR IRSTNTWHKL PIGPLGADVE VKSEYSKWSA LINTVLNRML DSFIVCDEHD RRLLESILAH YSMKKTIIVR KFESFDFSNG KVSGHPTFVD MITCKNEEVL RALVDSMNIE KLVISDKNES PSSILNERNV MSVFTLSTVN SGTRYGKAGD TIRMDPVYYS KDIVKLAVTG ADELHDVVSL ISEEKLQIDI LQKRLREMQS HHQNEIVNLE KKKNEFNEVI RRKKRKLDEI ESKINEEGDL SNIEKYKSEI EAHKDQIKTR EGVIEALTED LESRNEILKK LKESVKELKV QLTEATAARD RAKKNLHDYE VELSTNKDNR VSYLSEKKKI ETQLEKTNAK IEEGNNKLQQ LIDEAEKKCR REEVTITSND TQDSIRDEYA LVQTQVKEAE KQIGKPFEEI QNDLIEAKER QRLAEESLKN LSRTYKSLDS DLKIRFNFVH TTILSSVEQA SRTFENCMAL RGFKGSLSFD HGERKLTLLA QTKSDDKQRE VTSLSGGEKS FAQISLLLSI WKVMDSKIRG LDEFDVFMDS VNRSISIKLL LNELRQYPKS QNIFITPQDI AVVGDLNSSD VKIHKMSDPR KDT
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