Gene PICST_30981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30981 
Symbol 
ID4838260 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1425442 
End bp1426115 
Gene Length674 bp 
Protein Length217 aa 
Translation table12 
GC content48% 
IMG OID640389575 
Productpredicted protein 
Protein accessionXP_001383563 
Protein GI150864648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCC TGTCTATCTC TGTGTCCCTT CCTGGGGGTG TGTCTGCCCC ACCTATTCCT 
GTTCGTTCTA TGTTGCTGCC TGTTTCTGAT CTTCTGTCTG ATGATGTGGC CATGGCTGAT
GACGCTGCCA TGGCTGATGA CGATACCATT GTTGATAATG GTACCGTAAT TGATGACGTC
GTCCTGCCTG TTGCTAGTAA ACTGCTTGTT GCTAGTAGGC TGGCTGATGA TGGTGCCCTG
GCTGATGATT CGGCCATGTC CGATGATTAT GTCATGGATG ATGAGACTAT GTCTCTCGCA
CCGATACCAT CTTGTTCCGA CTACGACTCG TGCTATTCTT ATGACTCGGA TATTTCTCCT
GACGCGGATG ATGATGAAAC CCTTCCCATC CAGCCTACCA CCGTGATTTC TCCTGTTTCT
CTGCGCGCTT CTTCCAATGC TTCTTCACGT CCGCAATGTC TTGCTGGCCC TGCACCTCCT
CTTCTTCTCA CTCATGAATC CAATTCTGGG GGGAAACAGA TTCAGATCCA CAGCAAGTCT
CATGCATCGA GAAGAACTTA CGATACACCA AATATGAATC AGGAAGAGAT AAGTGAGCGA
AGGCTCACTA AACATAAGCT TACACCAGTT CCCTCTTATG ACAATGCTGT GGCTCACAAG
AAGGTTAGAA TTGA
 
Protein sequence
MPISSISVSL PGGVSAPPIP VRSMLSPVSD LSSDDVAMAD DAAMADDDTI VDNGTVIDDV 
VSPVASKSLV ASRSADDGAS ADDSAMSDDY VMDDETMSLA PIPSCSDYDS CYSYDSDISP
DADDDETLPI QPTTVISPVS SRASSNASSR PQCLAGPAPP LLLTHESNSG GKQIQIHSKS
HASRRTYDTP NMNQEEISER RLTKHKLTPV PSYDNAN