Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30981 |
Symbol | |
ID | 4838260 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1425442 |
End bp | 1426115 |
Gene Length | 674 bp |
Protein Length | 217 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640389575 |
Product | predicted protein |
Protein accession | XP_001383563 |
Protein GI | 150864648 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCC TGTCTATCTC TGTGTCCCTT CCTGGGGGTG TGTCTGCCCC ACCTATTCCT GTTCGTTCTA TGTTGCTGCC TGTTTCTGAT CTTCTGTCTG ATGATGTGGC CATGGCTGAT GACGCTGCCA TGGCTGATGA CGATACCATT GTTGATAATG GTACCGTAAT TGATGACGTC GTCCTGCCTG TTGCTAGTAA ACTGCTTGTT GCTAGTAGGC TGGCTGATGA TGGTGCCCTG GCTGATGATT CGGCCATGTC CGATGATTAT GTCATGGATG ATGAGACTAT GTCTCTCGCA CCGATACCAT CTTGTTCCGA CTACGACTCG TGCTATTCTT ATGACTCGGA TATTTCTCCT GACGCGGATG ATGATGAAAC CCTTCCCATC CAGCCTACCA CCGTGATTTC TCCTGTTTCT CTGCGCGCTT CTTCCAATGC TTCTTCACGT CCGCAATGTC TTGCTGGCCC TGCACCTCCT CTTCTTCTCA CTCATGAATC CAATTCTGGG GGGAAACAGA TTCAGATCCA CAGCAAGTCT CATGCATCGA GAAGAACTTA CGATACACCA AATATGAATC AGGAAGAGAT AAGTGAGCGA AGGCTCACTA AACATAAGCT TACACCAGTT CCCTCTTATG ACAATGCTGT GGCTCACAAG AAGGTTAGAA TTGA
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Protein sequence | MPISSISVSL PGGVSAPPIP VRSMLSPVSD LSSDDVAMAD DAAMADDDTI VDNGTVIDDV VSPVASKSLV ASRSADDGAS ADDSAMSDDY VMDDETMSLA PIPSCSDYDS CYSYDSDISP DADDDETLPI QPTTVISPVS SRASSNASSR PQCLAGPAPP LLLTHESNSG GKQIQIHSKS HASRRTYDTP NMNQEEISER RLTKHKLTPV PSYDNAN
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