Gene PICST_30979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30979 
Symbol 
ID4838254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1418378 
End bp1418947 
Gene Length570 bp 
Protein Length189 aa 
Translation table12 
GC content48% 
IMG OID640389569 
Productpredicted protein 
Protein accessionXP_001383897 
Protein GI150864894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.742506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.5687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCC AACAGCCTGA CGTTCAGGCG TTGTTTGAAC AATACCCTCT GGGGGTGGAA 
ACTTGGAAAG CTGTCGAAAC CAAGTACACA ATCGCCAGCT ATAGGGATGC GGTCGGCTAT
CTCAAGTACT TATTTGATCG CCTTGCTGAT CCGACCATTA CGACTGAAGC TGGGTTATTG
ATTGCTGAAA AGTTGACTGC GTTTATGGCC AAGTACAATG ACGAGTCCAG GAAAGCGCTC
CTCTTCCTTT ATGGTACAGG GAACTCCAAG GTGAGAGATC TCTTCTTTTC TCAAGTTGGA
CTGACTGCCA CCGTGACGGC GGACGAAGTT TTGAATTTCT TTACCTATCA TGATGAGCTT
TCCCCACCTG CAATATCCTC CGCCTTGCTT GTACTGTCCT CGTCTCAATC TGGGTATGCA
ATAACGCCTT CTCCATCTGG CCGTCGTCAG GTTACTCGCA ACATGACGAG AGCAAAAGGT
AATGACCCGG TGTGGAATAT TGACTGCTAC AATTGCTATG GGTGTGGTCA TACGGCGAAT
TCCTGCACCT CTCCTTTTCG TGAAAGTTAA
 
Protein sequence
MSFQQPDVQA LFEQYPSGVE TWKAVETKYT IASYRDAVGY LKYLFDRLAD PTITTEAGLL 
IAEKLTAFMA KYNDESRKAL LFLYGTGNSK VRDLFFSQVG STATVTADEV LNFFTYHDEL
SPPAISSALL VSSSSQSGYA ITPSPSGRRQ VTRNMTRAKG NDPVWNIDCY NCYGCGHTAN
SCTSPFRES