Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30979 |
Symbol | |
ID | 4838254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1418378 |
End bp | 1418947 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640389569 |
Product | predicted protein |
Protein accession | XP_001383897 |
Protein GI | 150864894 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.742506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.5687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCC AACAGCCTGA CGTTCAGGCG TTGTTTGAAC AATACCCTCT GGGGGTGGAA ACTTGGAAAG CTGTCGAAAC CAAGTACACA ATCGCCAGCT ATAGGGATGC GGTCGGCTAT CTCAAGTACT TATTTGATCG CCTTGCTGAT CCGACCATTA CGACTGAAGC TGGGTTATTG ATTGCTGAAA AGTTGACTGC GTTTATGGCC AAGTACAATG ACGAGTCCAG GAAAGCGCTC CTCTTCCTTT ATGGTACAGG GAACTCCAAG GTGAGAGATC TCTTCTTTTC TCAAGTTGGA CTGACTGCCA CCGTGACGGC GGACGAAGTT TTGAATTTCT TTACCTATCA TGATGAGCTT TCCCCACCTG CAATATCCTC CGCCTTGCTT GTACTGTCCT CGTCTCAATC TGGGTATGCA ATAACGCCTT CTCCATCTGG CCGTCGTCAG GTTACTCGCA ACATGACGAG AGCAAAAGGT AATGACCCGG TGTGGAATAT TGACTGCTAC AATTGCTATG GGTGTGGTCA TACGGCGAAT TCCTGCACCT CTCCTTTTCG TGAAAGTTAA
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Protein sequence | MSFQQPDVQA LFEQYPSGVE TWKAVETKYT IASYRDAVGY LKYLFDRLAD PTITTEAGLL IAEKLTAFMA KYNDESRKAL LFLYGTGNSK VRDLFFSQVG STATVTADEV LNFFTYHDEL SPPAISSALL VSSSSQSGYA ITPSPSGRRQ VTRNMTRAKG NDPVWNIDCY NCYGCGHTAN SCTSPFRES
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