Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30978 |
Symbol | |
ID | 4838253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1417596 |
End bp | 1418216 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 12 |
GC content | 50% |
IMG OID | 640389568 |
Product | predicted protein |
Protein accession | XP_001383896 |
Protein GI | 150864893 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.628694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.245706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACA CACCCACTAT GCTCTCTTGG CTTCTTCTTC CTCTGCCAGC TTTATTTTTG ATTCAGGTGC TTCTACCCAC ATTTGTAACA AGAGAAGTCT TTCTCTGGTT CTGTCACGAA GAACCTCTCT CGATTGCCGG TCGTGGTACT CTTGTGTTTG ATCTCCAAGG TCAGAAGATT CGTGTCTTTA ACGTTCTTTA TGTTCCTGAC TGTACTCAGA ATCTTCTTTC CATCCTGGCT GTTACTACTA CGGGCGACAA ACTTGTTATC TCTCATGATG ACATTGTTCG CCTTAAGTAT GGCCAACTTG CTACCAGAGA CCTGAGAAAT CTTTACTTGC TGTGTCTCAA AATTGTCCGC CCCTCGACTG TCTCGCGGGC TAACCACTCT GCCTACTCGG CCCCCGCTCC TGTTACGGTC GCTGCTCCTG CTGCGGACGC TGGTGTGGCA CCTGTTTCTG CCTCTGCTCT TGTTCATGCT CGCCTTGGCC ACCCCTCTCC TACTGTCGTT CGACTGGCCT TGAAATATCC GAACATGCCT CGCACGGTTG TTCACGACTC GATTTCATGT GAAGCATGTC TTAGCTCCAA GAGCACTCGG GTGATTCGCA AGACGTGCTG A
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Protein sequence | MFNTPTMLSW LLLPSPALFL IQVLLPTFVT REVFLWFCHE EPLSIAGRGT LVFDLQGQKI RVFNVLYVPD CTQNLLSISA VTTTGDKLVI SHDDIVRLKY GQLATRDSRN LYLSCLKIVR PSTVSRANHS AYSAPAPVTV AAPAADAGVA PVSASALVHA RLGHPSPTVV RSALKYPNMP RTVVHDSISC EACLSSKSTR VIRKTC
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