Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30944 |
Symbol | |
ID | 4837872 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1330665 |
End bp | 1331146 |
Gene Length | 482 bp |
Protein Length | 106 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389187 |
Product | predicted protein |
Protein accession | XP_001383881 |
Protein GI | 126134713 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1911] Ribosomal protein L30E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.212607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.515447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGTA TACTATTTTA ACGATGTCTG CCACGAACCA CTAGTCGAGT GAACTTTCAG AAATGAAAGG CACTTATACT TTATGAAACA TTAATGTAAT ACCATAATGA CTATAACGAT TCAGCACATC ACACAGCCCT TAGGCTTCAT ACTAACATCT TCAGGCCCCA AAATCTAAGA ACCAAGAAAA CATTAACGCC AAGTTAGGTT TAGTTATCAA GTCTGGTAAG TACACCCTTG GTTACAAGTC CGTTGTCAAG TCCTTGAGAA CTGGTAAGGC CAAGTTGGTC ATCATTGCTG GTAACACTCC AGTTTTGAGA AAGTCTGAAT TGGAATACTA CGCCATGTTG TCCAAGACCC CAGTCTACTA CTTCCAAGGT GGTAACAACG AATTGGGTAC TGTCTGTGGT AAGTTGTTCA GAGTCGGTAC CTTGTCTGTT TTGGACGCTG GTGACTCTGA CATCCTTACT TCTATTGCTT AA
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Protein sequence | MAPKSKNQEN INAKLGLVIK SGKYTLGYKS VVKSLRTGKA KLVIIAGNTP VLRKSELEYY AMLSKTPVYY FQGGNNELGT VCGKLFRVGT LSVLDAGDSD ILTSIA
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