| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30867 |
|---|
| Symbol | |
|---|
| ID | 4838304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1139225 |
|---|
| End bp | 1140091 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640389619 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383503 |
|---|
| Protein GI | 150864610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTC CGTTAATCAA TCGTTCCTTG ACTACAATTA GAACCGAGCT CGAGTTCTTG
AAGGACTCTG AAGTCATCAC CGAGGAATTG TACCAAAAGT TGAACCAGAG CCTTCCTGCA
AAATTCACCA AGGATATGAA CGCTTGGGGT GTAGAGAAGC TCGGCTTAGG TAACAACAAC
AACAACAACA GCACCACTAC TGCCACTGAT AGAATTGCTG AAGATTTGGC TATGACTACT
ATTTCAACTC CTTCTCAAAT CGAAGCTCCC CCACACCCTC CACGCTCAAA CTCCACCGCT
AAGAATATTG GTTACTGTAA AGTCTTATAC GACTACCGTG CACTGGAAGC GGACGACTTG
GATCTCAAGA AGGAAGACCG TATAGCCATC GTCCAACACT TGTCACCTGA CTGGTGGAAA
GGATACAAAC AAGATTCGTC TCCAGAAAAG GCAGGGGTAT TTCCTTCCAA TTACGTAGTG
GAGATCACTG AGAAGGAGTT CCAGGACTCT TTCAATAGGG CACCTACTAC AGTTCCAGAA
AAGGCATCAT ACAAACCACA AAACAATTTG TATCAGCAAC ACCAAATGCC TCCTCCAGAT
TACGGTTCTC CATATGGACA GCCTCCAGTG CAACACCAAC CTTCATATGG TGGATACGCT
CAATATCCTC CTCCTTCAAC TAACTACTAT CAACCTCCTC CACCTCAGCA ACAACCTCAG
CAAGTTCAAC AAGTTGAGGT TCAACCACAG TCATCGGGAG TTAATGCTCA TCCTCATTTG
AAGAAGTTTG GAAGCAAGTT GGGTAATGCG GCTATCTTTG GTGCCGGTGC CACAATCGGT
AGTAATGTGG TCAACTCCAT TTTCTAA
|
|---|
| Protein sequence | MSVPLINRSL TTIRTELEFL KDSEVITEEL YQKLNQSLPA KFTKDMNAWG VEKLGLGNNN
NNNSTTTATD RIAEDLAMTT ISTPSQIEAP PHPPRSNSTA KNIGYCKVLY DYRASEADDL
DLKKEDRIAI VQHLSPDWWK GYKQDSSPEK AGVFPSNYVV EITEKEFQDS FNRAPTTVPE
KASYKPQNNL YQQHQMPPPD YGSPYGQPPV QHQPSYGGYA QYPPPSTNYY QPPPPQQQPQ
QVQQVEVQPQ SSGVNAHPHL KKFGSKLGNA AIFGAGATIG SNVVNSIF
|
|---|
| |