| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30840 |
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| Symbol | SFU1 |
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| ID | 4837767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1076135 |
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| End bp | 1077595 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 12 |
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| GC content | 51% |
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| IMG OID | 640389082 |
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| Product | GATA type transcriptional activator of nitrogen-regulated genes |
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| Protein accession | XP_001383491 |
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| Protein GI | 150864605 |
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| COG category | [K] Transcription |
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| COG ID | [COG5641] GATA Zn-finger-containing transcription factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCC TAACAGCACC CGCGTCTTCT GAGACAGCGA CACCAGTTAA ACAGGAGGAC
TCCTCGACAC TCGAGCACAT CCAGGTGCCG TCCACTGCTA GCCTTGTCAC TCCAGCTACG
CCAGCAGCAC CAACAACTCC GGCTACACCG ACTTCGTGTC TGACGGCTGC ACTTGCGACT
GTAACATCTC CGCAAGATGG CCAACAATGC TCAAACTGTG GCACTACCAA AACTCCACTT
TGGAGGAGGG CGCCTGATGG AACCCTCATC TGCAATGCCT GTGGGTTGTA CCTTCGTTCA
AACAACACCC ATAGGCCCGT AAATCTCAAG CGTCCTCCCA ACACGATACC CATAACCAAA
ACCGAAGAAG GATCCTGTAA AGGCGATGGC AGATGTAACG GAACTGGAGG ATCGGCTGCC
TGTAAAGGAT GTCCCGCCTA CAACAACCGG GTTGTAGTAA GCAAACGCGA GAAGTCTGCA
TCTACACCTC CCATGGAATC GACTCCGGCC ACATCACCAC AGCCAGAAAA GAGAGTAGCT
ACCGATGTAG ACGAAGACTC TCTAGCCATT GCCTGTTTCA ACTGTGGAAC CACTATTACT
CCACTCTGGA GAAGGGATGA TGCCGGTAAT ACTATCTGCA ATGCCTGTGG ACTATACTAC
AGATTGCATG GGTCGCATCG TCCAATCAGG ATGAAAAGAA CGACCATCAA GAGAAGGAAG
AGGAACATGG CTTCGGGCAA GAAAGATGCT TCGGCCTCTG ACTCAAACAC AGAAGACAAA
GAGCCTCGTA GTCCGGAGGA CGCTCGAAAT ACCCATAGTC CACAATTGAA TACTCTTCAT
TCCCCTACTG CAGGTTTGGG CTCTCCTAAT GGGTCGACTC TACCTCCAAT TTCGTACAAC
CATCCTCTCC TGAGACTGGC TCCTCCGGTG TCAAACTCTC CTACTTCGTA CTATCCTCCA
TACACCCCTG GAGGACGTAT TCCAAACGGT CCAGGTCCTC TACCAGGTCC TCCACCACCT
CAACCGGCTT CGCAGTACGG CTTCTCCATC CCCCAAACCC ACCAACCACC TTTGCATTAT
GGAATATACA ACCAAAATTC GGACATAAAA CTTCCTCTGA TCCAGCTCCA CGAAGCTGGG
CCCCACAGCC GGCACCTTTT GGCACCTATC ATCAAGAAAG AAGCCATTCC GTCAATCTCT
ACATCCAAAT CTGCATCAAT TATCCCGCCT GTGTCGGAAT TCGTAGGTTC TCGACAATCT
ACTCCGGGAG TATCTGATGG TATCAAAAAG AGATCGGCGT CTTCAACTCC AATTGCGATC
GATTTTACGT CGACTTTCAG GTCTCCTGCT GCTTCTAACG GTAATACGTC TACTATATCT
GATACTAACA ACGATAGTGA AGGCAGCAAA AAGGACCACC GCACGCACGC ATTGTCGATT
GGAGGCTTGT TAAATGGATA G
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| Protein sequence | MSSLTAPASS ETATPVKQED SSTLEHIQVP STASLVTPAT PAAPTTPATP TSCSTAALAT
VTSPQDGQQC SNCGTTKTPL WRRAPDGTLI CNACGLYLRS NNTHRPVNLK RPPNTIPITK
TEEGSCKGDG RCNGTGGSAA CKGCPAYNNR VVVSKREKSA STPPMESTPA TSPQPEKRVA
TDVDEDSLAI ACFNCGTTIT PLWRRDDAGN TICNACGLYY RLHGSHRPIR MKRTTIKRRK
RNMASGKKDA SASDSNTEDK EPRSPEDARN THSPQLNTLH SPTAGLGSPN GSTLPPISYN
HPLSRSAPPV SNSPTSYYPP YTPGGRIPNG PGPLPGPPPP QPASQYGFSI PQTHQPPLHY
GIYNQNSDIK LPSIQLHEAG PHSRHLLAPI IKKEAIPSIS TSKSASIIPP VSEFVGSRQS
TPGVSDGIKK RSASSTPIAI DFTSTFRSPA ASNGNTSTIS DTNNDSEGSK KDHRTHALSI
GGLLNG
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