Gene PICST_30831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30831 
Symbol 
ID4837907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1050268 
End bp1051086 
Gene Length819 bp 
Protein Length272 aa 
Translation table12 
GC content42% 
IMG OID640389222 
Productpredicted protein 
Protein accessionXP_001383827 
Protein GI150864843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTT TCATTTACAC CTCTTTGATT TTGCTAGTCT CTCGATGTAG AGCAGACCTT 
CCAGTTGAAT TAAAGGATTT CAAGATGGTC CCAAGAAAAG CCTTGGACTC AAACAAAATT
ATCAGGATTC CTTCGCTTGA CGAAGACACA GATTTATCGT ATTTTGATAA TATAGACAAC
GTTATTGTGA TCGAGGACAC TGGAACATTA GTTGTCAATA AGCACAAGCT TAACACTGCG
GAAAGAACAG GAGGTAACAT GTTTGCTTTC TTTCCTGACT TCAAACCTGA TAAGACAACA
TGGTACGAAT TTAAGCCTGG AAAGTCAGAC ACTGTGTTGG GTCCCAGACT TCCATTGAGT
GGGTGTCTCA ATAGCAACTT TGGCGACGGT GGATCTCTCG GAGGGTCCAT CTCGACAACT
TTCGGAAAGA CCGCTACTTT GGATTTTCCA TGGGTTTGGG ACTTGGCTGG TATGGTTCTG
GTCAATCTAG ACTGGAGTCC TGAAGTAGTT TCTTCGGTTT CCTATCTGGG ATCCTATTCT
TGCAATATCG GTAAGGGAGA AACCGGACAG GTATTCATTC AGCCTTTCTT TATTGAAGTT
GGCAACCCTC AGTCAAGAAC CATAAAGATC AATAGAGGTA GAACTTTCAC AAGTCCTTTT
AGCAAAAAGC CAACACATCT TGAGATAGGA GAGTGGGGTC ACCTAGGAAA GAAAATCCGT
CTCAACAGTC CTTTTGCCAT GCCAATTTTC ACCTGTACTA CTGACCCTAG ATATCTTGCT
TGTGGTGCCA ACATTCTTGG TGATTCCTAC GCGTTTTAG
 
Protein sequence
MKFFIYTSLI LLVSRCRADL PVELKDFKMV PRKALDSNKI IRIPSLDEDT DLSYFDNIDN 
VIVIEDTGTL VVNKHKLNTA ERTGGNMFAF FPDFKPDKTT WYEFKPGKSD TVLGPRLPLS
GCLNSNFGDG GSLGGSISTT FGKTATLDFP WVWDLAGMVS VNLDWSPEVV SSVSYSGSYS
CNIGKGETGQ VFIQPFFIEV GNPQSRTIKI NRGRTFTSPF SKKPTHLEIG EWGHLGKKIR
LNSPFAMPIF TCTTDPRYLA CGANILGDSY AF