Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30831 |
Symbol | |
ID | 4837907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1050268 |
End bp | 1051086 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389222 |
Product | predicted protein |
Protein accession | XP_001383827 |
Protein GI | 150864843 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTTT TCATTTACAC CTCTTTGATT TTGCTAGTCT CTCGATGTAG AGCAGACCTT CCAGTTGAAT TAAAGGATTT CAAGATGGTC CCAAGAAAAG CCTTGGACTC AAACAAAATT ATCAGGATTC CTTCGCTTGA CGAAGACACA GATTTATCGT ATTTTGATAA TATAGACAAC GTTATTGTGA TCGAGGACAC TGGAACATTA GTTGTCAATA AGCACAAGCT TAACACTGCG GAAAGAACAG GAGGTAACAT GTTTGCTTTC TTTCCTGACT TCAAACCTGA TAAGACAACA TGGTACGAAT TTAAGCCTGG AAAGTCAGAC ACTGTGTTGG GTCCCAGACT TCCATTGAGT GGGTGTCTCA ATAGCAACTT TGGCGACGGT GGATCTCTCG GAGGGTCCAT CTCGACAACT TTCGGAAAGA CCGCTACTTT GGATTTTCCA TGGGTTTGGG ACTTGGCTGG TATGGTTCTG GTCAATCTAG ACTGGAGTCC TGAAGTAGTT TCTTCGGTTT CCTATCTGGG ATCCTATTCT TGCAATATCG GTAAGGGAGA AACCGGACAG GTATTCATTC AGCCTTTCTT TATTGAAGTT GGCAACCCTC AGTCAAGAAC CATAAAGATC AATAGAGGTA GAACTTTCAC AAGTCCTTTT AGCAAAAAGC CAACACATCT TGAGATAGGA GAGTGGGGTC ACCTAGGAAA GAAAATCCGT CTCAACAGTC CTTTTGCCAT GCCAATTTTC ACCTGTACTA CTGACCCTAG ATATCTTGCT TGTGGTGCCA ACATTCTTGG TGATTCCTAC GCGTTTTAG
|
Protein sequence | MKFFIYTSLI LLVSRCRADL PVELKDFKMV PRKALDSNKI IRIPSLDEDT DLSYFDNIDN VIVIEDTGTL VVNKHKLNTA ERTGGNMFAF FPDFKPDKTT WYEFKPGKSD TVLGPRLPLS GCLNSNFGDG GSLGGSISTT FGKTATLDFP WVWDLAGMVS VNLDWSPEVV SSVSYSGSYS CNIGKGETGQ VFIQPFFIEV GNPQSRTIKI NRGRTFTSPF SKKPTHLEIG EWGHLGKKIR LNSPFAMPIF TCTTDPRYLA CGANILGDSY AF
|
| |