Gene PICST_30756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30756 
Symbol 
ID4838202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp863835 
End bp865568 
Gene Length1734 bp 
Protein Length577 aa 
Translation table12 
GC content38% 
IMG OID640389517 
Producthypothetical protein 
Protein accessionXP_001383797 
Protein GI150864818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCTC CCACAAAAGT ATCTAATTCA AGGTCCGCCC GCAAGAAGGC GGGACTGAAA 
CTGATGAACG AAGAATTATC AAAACGTATT CTACTACTCT GTATTGAACA TCTAATTCCA
TTCGAGCAAA TTAATTCATC TTCGTTCAGA TTACTCTTCA ACTTCAATAA TGGATTATCG
TTTATTCCAG ATCCAGAAAC ATTGACTCAT CTAGCCAACG AAATGTACTC TGAATACCAG
AATTATTTCA AACACTATTT TGAGAATTCA TTAGACAAAG CAATAAAGAT ATCCCTATCC
CTCCATAAAT GGACTCCTTC AAACTCACTA GAGCCATATG TGTTTGCCAA CTATCACTTC
ATCAACGAAA GATTTCGTTT ATGCGAATTG CCTTTGGGGT TTTTTCCATA TACGGAGAAG
AATATGTCAC AACACTTGAT ACCCAATCCT GTTCTCAAAG AAAGATTACT CTTTGTAACT
TCCAATCACG ACCTAGATGA TTACAATCTC CAAATGGTGA AATACCTAAT GGATGAAGAT
GGAGACATCA CAAAATCCAG TCAGTTTCAC TGTCTAACCA AACTTTTCGG CGAATACTTG
TTGAGTTTCT TCATCGAAGT GGCAGAGATC TTGCTGTTGG AAACCAAGCT AGCTGTCTTC
GATATCGGGT CCATAACAGG GGCTAAACTT ATTCCAGTAT TAGTATGCAA TTTTATCTAT
CCTATCTATA TCAAGTTTCA CCATTTAAGC TTTGAAAAGC TTGATCCACT TCCAGACGAC
AAGGACCGTG TTTGCTGGGG CACCTTGAAG AAATTGGAAC ATAGCCACGA CAAAGCTTAC
ACAATGAGGA TCTTATCATG CTTGATAACC TATAGGGCCA ACATCGAACA GCTTATATCA
GATAGTACAT CTTCCATTTC GGAATCAGAC TGGGAGTTGA TTACTTTCGC TTACGAAATC
ACCATTAAGT TCCATGAAGT ACTTATAACC ACTCTTTCAT ATGACGTACC TGTCAGTCAT
TTGCTCTCGA AATGGGTAAA GATGTTGATA TTACATGTTC TAACTATCAC AAAAAGGCAT
TCTCAACTTC TTTCATTCAA CATAGAGTTA CCTTTGAAAA AGTTGTTTGA TAACCTTAAA
GAAACCCATT CCAAAATTGA AGCGAATTCT AGTTTGATTC TCGCAACCTA TCTACATCCA
TCAACGAAAA GATTCTTAAG AGATGACGAT GTAAACGCTG TAAACAGTTT CGTGGAGTCG
TTGTCCAAAG AACAAGAAAA TGAAAAACCA ACTTCCATAG ATAGCTTCGA TAATGTCGAT
GACATGATTC TAAATCTATT CGACTGCTCT GGGAAGTCTA CAAAAGAATG TTATAATTAC
GAGTCGTCTT CAATGAAGGA AATAAAGGAG ACAGAGAGAA ACTCGTATGC AAAAGAGGTT
GGACCATCAC TTCTAAGTTT CTGGAGTACT TATGCTAGAA AGTATCCTAC TCTTTCTCAA
CTAGCTAGAA ATGTGCTAGC AGTTCCCATT ACTACGGATA GAGGTTTCGA TCAGTTTAAG
TCTGCCTTTA CTCATCTAAA TCTGCCCTCT TCTGCCTCAC CTGAAATCGT TCCATTATCA
CAGCTTATTT ACTTCCTTCA CCGATTAGGC ACCACCTATG ATCTACATGC TATTGATCCA
AAGAATCTAG ATTTAGACAT TGAGGATTAC CGCATTACTG ACTATGAAGA ATAA
 
Protein sequence
MSPPTKVSNS RSARKKAGSK SMNEELSKRI LLLCIEHLIP FEQINSSSFR LLFNFNNGLS 
FIPDPETLTH LANEMYSEYQ NYFKHYFENS LDKAIKISLS LHKWTPSNSL EPYVFANYHF
INERFRLCEL PLGFFPYTEK NMSQHLIPNP VLKERLLFVT SNHDLDDYNL QMVKYLMDED
GDITKSSQFH CLTKLFGEYL LSFFIEVAEI LSLETKLAVF DIGSITGAKL IPVLVCNFIY
PIYIKFHHLS FEKLDPLPDD KDRVCWGTLK KLEHSHDKAY TMRILSCLIT YRANIEQLIS
DSTSSISESD WELITFAYEI TIKFHEVLIT TLSYDVPVSH LLSKWVKMLI LHVLTITKRH
SQLLSFNIEL PLKKLFDNLK ETHSKIEANS SLILATYLHP STKRFLRDDD VNAVNSFVES
LSKEQENEKP TSIDSFDNVD DMILNLFDCS GKSTKECYNY ESSSMKEIKE TERNSYAKEV
GPSLLSFWST YARKYPTLSQ LARNVLAVPI TTDRGFDQFK SAFTHLNSPS SASPEIVPLS
QLIYFLHRLG TTYDLHAIDP KNLDLDIEDY RITDYEE