Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30756 |
Symbol | |
ID | 4838202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 863835 |
End bp | 865568 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640389517 |
Product | hypothetical protein |
Protein accession | XP_001383797 |
Protein GI | 150864818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCCTC CCACAAAAGT ATCTAATTCA AGGTCCGCCC GCAAGAAGGC GGGACTGAAA CTGATGAACG AAGAATTATC AAAACGTATT CTACTACTCT GTATTGAACA TCTAATTCCA TTCGAGCAAA TTAATTCATC TTCGTTCAGA TTACTCTTCA ACTTCAATAA TGGATTATCG TTTATTCCAG ATCCAGAAAC ATTGACTCAT CTAGCCAACG AAATGTACTC TGAATACCAG AATTATTTCA AACACTATTT TGAGAATTCA TTAGACAAAG CAATAAAGAT ATCCCTATCC CTCCATAAAT GGACTCCTTC AAACTCACTA GAGCCATATG TGTTTGCCAA CTATCACTTC ATCAACGAAA GATTTCGTTT ATGCGAATTG CCTTTGGGGT TTTTTCCATA TACGGAGAAG AATATGTCAC AACACTTGAT ACCCAATCCT GTTCTCAAAG AAAGATTACT CTTTGTAACT TCCAATCACG ACCTAGATGA TTACAATCTC CAAATGGTGA AATACCTAAT GGATGAAGAT GGAGACATCA CAAAATCCAG TCAGTTTCAC TGTCTAACCA AACTTTTCGG CGAATACTTG TTGAGTTTCT TCATCGAAGT GGCAGAGATC TTGCTGTTGG AAACCAAGCT AGCTGTCTTC GATATCGGGT CCATAACAGG GGCTAAACTT ATTCCAGTAT TAGTATGCAA TTTTATCTAT CCTATCTATA TCAAGTTTCA CCATTTAAGC TTTGAAAAGC TTGATCCACT TCCAGACGAC AAGGACCGTG TTTGCTGGGG CACCTTGAAG AAATTGGAAC ATAGCCACGA CAAAGCTTAC ACAATGAGGA TCTTATCATG CTTGATAACC TATAGGGCCA ACATCGAACA GCTTATATCA GATAGTACAT CTTCCATTTC GGAATCAGAC TGGGAGTTGA TTACTTTCGC TTACGAAATC ACCATTAAGT TCCATGAAGT ACTTATAACC ACTCTTTCAT ATGACGTACC TGTCAGTCAT TTGCTCTCGA AATGGGTAAA GATGTTGATA TTACATGTTC TAACTATCAC AAAAAGGCAT TCTCAACTTC TTTCATTCAA CATAGAGTTA CCTTTGAAAA AGTTGTTTGA TAACCTTAAA GAAACCCATT CCAAAATTGA AGCGAATTCT AGTTTGATTC TCGCAACCTA TCTACATCCA TCAACGAAAA GATTCTTAAG AGATGACGAT GTAAACGCTG TAAACAGTTT CGTGGAGTCG TTGTCCAAAG AACAAGAAAA TGAAAAACCA ACTTCCATAG ATAGCTTCGA TAATGTCGAT GACATGATTC TAAATCTATT CGACTGCTCT GGGAAGTCTA CAAAAGAATG TTATAATTAC GAGTCGTCTT CAATGAAGGA AATAAAGGAG ACAGAGAGAA ACTCGTATGC AAAAGAGGTT GGACCATCAC TTCTAAGTTT CTGGAGTACT TATGCTAGAA AGTATCCTAC TCTTTCTCAA CTAGCTAGAA ATGTGCTAGC AGTTCCCATT ACTACGGATA GAGGTTTCGA TCAGTTTAAG TCTGCCTTTA CTCATCTAAA TCTGCCCTCT TCTGCCTCAC CTGAAATCGT TCCATTATCA CAGCTTATTT ACTTCCTTCA CCGATTAGGC ACCACCTATG ATCTACATGC TATTGATCCA AAGAATCTAG ATTTAGACAT TGAGGATTAC CGCATTACTG ACTATGAAGA ATAA
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Protein sequence | MSPPTKVSNS RSARKKAGSK SMNEELSKRI LLLCIEHLIP FEQINSSSFR LLFNFNNGLS FIPDPETLTH LANEMYSEYQ NYFKHYFENS LDKAIKISLS LHKWTPSNSL EPYVFANYHF INERFRLCEL PLGFFPYTEK NMSQHLIPNP VLKERLLFVT SNHDLDDYNL QMVKYLMDED GDITKSSQFH CLTKLFGEYL LSFFIEVAEI LSLETKLAVF DIGSITGAKL IPVLVCNFIY PIYIKFHHLS FEKLDPLPDD KDRVCWGTLK KLEHSHDKAY TMRILSCLIT YRANIEQLIS DSTSSISESD WELITFAYEI TIKFHEVLIT TLSYDVPVSH LLSKWVKMLI LHVLTITKRH SQLLSFNIEL PLKKLFDNLK ETHSKIEANS SLILATYLHP STKRFLRDDD VNAVNSFVES LSKEQENEKP TSIDSFDNVD DMILNLFDCS GKSTKECYNY ESSSMKEIKE TERNSYAKEV GPSLLSFWST YARKYPTLSQ LARNVLAVPI TTDRGFDQFK SAFTHLNSPS SASPEIVPLS QLIYFLHRLG TTYDLHAIDP KNLDLDIEDY RITDYEE
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