Gene PICST_30747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30747 
Symbol 
ID4838044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp842572 
End bp843288 
Gene Length717 bp 
Protein Length238 aa 
Translation table12 
GC content38% 
IMG OID640389359 
Productpredicted protein 
Protein accessionXP_001383793 
Protein GI126134537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0200364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAG GACCTCCGGA GAGCATTTTA CAACAAACGA TCGACAGCAT CGAAATCGAC 
CCGGAGCTAC TCACTTTAGA AAGAATAGAT GATACTATCA GACTAATCAA GAACGCTCGC
GATGAAAAGA TAGACCAGCT AGAAAAGAGC AAAAAGGGAC TTGAAGTCAC GATTAACCAA
CTCAATAACG AGATCAGTCT TTTGAACAAA ATCAGCGACT ACAACTACGA GGTTATCCGA
AACATAACTG AGATAGCCGG ATACAGCAAT ACCCAAATCA ACAGAGACGA AAACATATTC
AAGGTGCTAA ATAAGAAATC CGTCGAGTTA GACAACTATA AAGTGGTAAT TGCTAAGAAT
CTCAATGACT TGGAAAGTTC CATCAACTTT CTCAGATTGA ACAAGACAAA TTTGCAGAAA
AATGTTGATG AACTCAAAAC TAAAATCAAC AATCTTTTTA ATAATCCATT TGACGACAGC
GAAGCCAATG ACGACGATCT CGTCAACCAA GATGCTAACA TCTTGAAGAT CAACCTCTAC
CGTAACTTGG GAGTGAATAT CGATAATTTT GACGACGAAA ATGGTGAGAA TGACACTGTT
ACTACCAATG ACCATATACT CATCCATAAT AAGGACTCTA ACGTGTCATC AGTGTTTAAA
GTAGAACCCA AGTATAGCGA CTACTTTATC TCCAATTATC TCTGGGATCG GTTGTAG
 
Protein sequence
MIEGPPESIL QQTIDSIEID PELLTLERID DTIRLIKNAR DEKIDQLEKS KKGLEVTINQ 
LNNEISLLNK ISDYNYEVIR NITEIAGYSN TQINRDENIF KVLNKKSVEL DNYKVVIAKN
LNDLESSINF LRLNKTNLQK NVDELKTKIN NLFNNPFDDS EANDDDLVNQ DANILKINLY
RNLGVNIDNF DDENGENDTV TTNDHILIHN KDSNVSSVFK VEPKYSDYFI SNYLWDRL