Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30747 |
Symbol | |
ID | 4838044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 842572 |
End bp | 843288 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640389359 |
Product | predicted protein |
Protein accession | XP_001383793 |
Protein GI | 126134537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0200364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGAAG GACCTCCGGA GAGCATTTTA CAACAAACGA TCGACAGCAT CGAAATCGAC CCGGAGCTAC TCACTTTAGA AAGAATAGAT GATACTATCA GACTAATCAA GAACGCTCGC GATGAAAAGA TAGACCAGCT AGAAAAGAGC AAAAAGGGAC TTGAAGTCAC GATTAACCAA CTCAATAACG AGATCAGTCT TTTGAACAAA ATCAGCGACT ACAACTACGA GGTTATCCGA AACATAACTG AGATAGCCGG ATACAGCAAT ACCCAAATCA ACAGAGACGA AAACATATTC AAGGTGCTAA ATAAGAAATC CGTCGAGTTA GACAACTATA AAGTGGTAAT TGCTAAGAAT CTCAATGACT TGGAAAGTTC CATCAACTTT CTCAGATTGA ACAAGACAAA TTTGCAGAAA AATGTTGATG AACTCAAAAC TAAAATCAAC AATCTTTTTA ATAATCCATT TGACGACAGC GAAGCCAATG ACGACGATCT CGTCAACCAA GATGCTAACA TCTTGAAGAT CAACCTCTAC CGTAACTTGG GAGTGAATAT CGATAATTTT GACGACGAAA ATGGTGAGAA TGACACTGTT ACTACCAATG ACCATATACT CATCCATAAT AAGGACTCTA ACGTGTCATC AGTGTTTAAA GTAGAACCCA AGTATAGCGA CTACTTTATC TCCAATTATC TCTGGGATCG GTTGTAG
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Protein sequence | MIEGPPESIL QQTIDSIEID PELLTLERID DTIRLIKNAR DEKIDQLEKS KKGLEVTINQ LNNEISLLNK ISDYNYEVIR NITEIAGYSN TQINRDENIF KVLNKKSVEL DNYKVVIAKN LNDLESSINF LRLNKTNLQK NVDELKTKIN NLFNNPFDDS EANDDDLVNQ DANILKINLY RNLGVNIDNF DDENGENDTV TTNDHILIHN KDSNVSSVFK VEPKYSDYFI SNYLWDRL
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