Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30737 |
Symbol | |
ID | 4838039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 813087 |
End bp | 813647 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389354 |
Product | predicted protein |
Protein accession | XP_001383437 |
Protein GI | 150864568 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.19351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAC ACTCCACTGG GCATTTCATC TTGAAACATC TAGTGGAGTA CTTTAGTGCT AAACAGCTTG TGCGAAGAGG AGATTATTCC GTAACAAGAA CTAATGACTA CAGTGTCGTT TTGGTTAAAT CCAATACGTA TATGAACGAG TCTGGGCGAG GTTTTCGACA ATTTGTAGAC AACGAGGACT TTCAGCCCAG TCAGAGTATT GTCGTGATTC TCTACGATGA CTTTGATAAT AAGTTGGGAA AAGTAAAGCT ATCTGAGTTG AAGAAGAACG AATCGCATAA TGGTATTGGA GATATACTGC GAGCTCTTCA TGGGATAAAG TCAGACGTCA AAATATACAA GTTGGGAATC GGAATAGGAC CCAAACCTTC TAAAGCCAGT GGTGCTATCG TCAGTAATTG GGTCCTATCT AAGTTTACCG ATGAAGAGTT AACCATTCTA CGGGAAACTA GTTTTAATTT GGTAACCAAG TATGTGGATG AGATCTACGA GAATAACGCA GTAGGAGACT GTAACTTGTT GAATCAGAAG ATTGCACAAG CATTACCGTA G
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Protein sequence | MNRHSTGHFI LKHLVEYFSA KQLVRRGDYS VTRTNDYSVV LVKSNTYMNE SGRGFRQFVD NEDFQPSQSI VVILYDDFDN KLGKVKLSEL KKNESHNGIG DISRALHGIK SDVKIYKLGI GIGPKPSKAS GAIVSNWVLS KFTDEELTIL RETSFNLVTK YVDEIYENNA VGDCNLLNQK IAQALP
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