Gene PICST_30737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30737 
Symbol 
ID4838039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp813087 
End bp813647 
Gene Length561 bp 
Protein Length186 aa 
Translation table12 
GC content40% 
IMG OID640389354 
Productpredicted protein 
Protein accessionXP_001383437 
Protein GI150864568 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.19351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAC ACTCCACTGG GCATTTCATC TTGAAACATC TAGTGGAGTA CTTTAGTGCT 
AAACAGCTTG TGCGAAGAGG AGATTATTCC GTAACAAGAA CTAATGACTA CAGTGTCGTT
TTGGTTAAAT CCAATACGTA TATGAACGAG TCTGGGCGAG GTTTTCGACA ATTTGTAGAC
AACGAGGACT TTCAGCCCAG TCAGAGTATT GTCGTGATTC TCTACGATGA CTTTGATAAT
AAGTTGGGAA AAGTAAAGCT ATCTGAGTTG AAGAAGAACG AATCGCATAA TGGTATTGGA
GATATACTGC GAGCTCTTCA TGGGATAAAG TCAGACGTCA AAATATACAA GTTGGGAATC
GGAATAGGAC CCAAACCTTC TAAAGCCAGT GGTGCTATCG TCAGTAATTG GGTCCTATCT
AAGTTTACCG ATGAAGAGTT AACCATTCTA CGGGAAACTA GTTTTAATTT GGTAACCAAG
TATGTGGATG AGATCTACGA GAATAACGCA GTAGGAGACT GTAACTTGTT GAATCAGAAG
ATTGCACAAG CATTACCGTA G
 
Protein sequence
MNRHSTGHFI LKHLVEYFSA KQLVRRGDYS VTRTNDYSVV LVKSNTYMNE SGRGFRQFVD 
NEDFQPSQSI VVILYDDFDN KLGKVKLSEL KKNESHNGIG DISRALHGIK SDVKIYKLGI
GIGPKPSKAS GAIVSNWVLS KFTDEELTIL RETSFNLVTK YVDEIYENNA VGDCNLLNQK
IAQALP