Gene PICST_30736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30736 
Symbol 
ID4838022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp811709 
End bp812869 
Gene Length1161 bp 
Protein Length386 aa 
Translation table12 
GC content40% 
IMG OID640389337 
Productpredicted protein 
Protein accessionXP_001383789 
Protein GI150864812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.227681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG ACGAATTCGA AAGTGTAGAA GAGACCCCAG AAAGCATAGA ACATGAAGAA 
GGCAGAGAAA ATTTAGAAGA AAATGTTGAC ATTGACTCTG AACAATCCGA ACGAACGGAA
CAAACAGAGC AACGTATACA AGATCAAGCA GAACAACCTA TAGAACACCA AGAAGAAGAG
CAGCAACAAA ATCAAGATGA AATAGAACTA AAAAAAGTAG AATATGAAGA TCTTGAGTCA
GACAGCGATT TCGGCTCTTT TGACGAAGCT TCGTTTGAAG ATTTCCAAAC CAATGAAGAC
AGCGACATCA ACCTACCAAC CAACGAGACG TCACCACAGT CTACGCAAAT CTCAACAGAA
TATACAGAAA AGAGTTTTGT TCAGTTCCGC GAAGATGATT TTGAAGATAA GCAAGCTTTC
ACATCGAAAC TCTCAAGTGT ACTAAATCAA GTGTTTCCAG ATACTAAAGA AAGTCATCAT
CAGACAACTT CTACCATAAA TGATCTTCTC TCTGAACGCT CTGCACAAAT CTTCTCTCAA
TTATCCACAA TGCCCCATTT ACGTCCCCCC AATTGGGTCA AGCTGAAGAT ACGTCACAAT
TTATTGATCT CGTTGGGAAT ACCGATCAAC CTTGATGAGC TTGCTACACC AGCAAATTCA
ACTTCTGACG CCAACAATCA GAACAATAAC AAACACAATA GTAATAGTAA CACTCTCAAA
GTAGAAGTCA ACGCTGGACG TCGTAAATCC ATCTCTACTC TGGATATTTC GTGGGAAGGT
TTCAATATTC CCGAATTCGA GACGTTGCAC ATCAGCCCCG ATGGTATGCT GGAATTGATA
GCGAATACCC GCGATTTCTT GTCAAAGGTA GAAACAGATA ATTTGAACAA TTCTTCACGT
CAATTTCTTG AAGAAAATCA GCATGAAGAT GTGTTGAGCA AGAAGTTGGC TCAATTTGAA
GAAAACTATA ACGACTTGAT CATTTTGGCT TCTGTGTGGT CTCACCATCT TCTGCAGCTT
ACCAAAGATT TCGAAATATA TGAGTCCGTG GTCCAAAATC ACATTGGTTA CAGTCAGAAG
CTCCGTCGTG ACGAAATCCT TGACAACTTG AAGAAGGTTA AGGTCACGAA GAAATATAAA
AAGAAAGGAA TCTGGAACTG A
 
Protein sequence
MSNDEFESVE ETPESIEHEE GRENLEENVD IDSEQSERTE QTEQRIQDQA EQPIEHQEEE 
QQQNQDEIEL KKVEYEDLES DSDFGSFDEA SFEDFQTNED SDINLPTNET SPQSTQISTE
YTEKSFVQFR EDDFEDKQAF TSKLSSVLNQ VFPDTKESHH QTTSTINDLL SERSAQIFSQ
LSTMPHLRPP NWVKSKIRHN LLISLGIPIN LDELATPANS TSDANNQNNN KHNSNSNTLK
VEVNAGRRKS ISTSDISWEG FNIPEFETLH ISPDGMSELI ANTRDFLSKV ETDNLNNSSR
QFLEENQHED VLSKKLAQFE ENYNDLIILA SVWSHHLSQL TKDFEIYESV VQNHIGYSQK
LRRDEILDNL KKVKVTKKYK KKGIWN