Gene PICST_30727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30727 
Symbol 
ID4837994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp785165 
End bp785644 
Gene Length480 bp 
Protein Length159 aa 
Translation table12 
GC content48% 
IMG OID640389309 
Productpredicted protein 
Protein accessionXP_001383430 
Protein GI126133811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAT GGGGGGCTAA GATCTTTGAG AACGACGGAG CCTTGGATCA ATTAGCGGAT 
TTGACCAAGA ACGAGCAGTC TCCCTTGGAA AGCATTGTCC AGGGCCTCAT GGAAGTGTTA
TCGTCGGAAT ACGTAGACAG TTATGAAGGC GAAGGCATTC TCGTGTTGGC AGTATTTGTG
ATAGGATTCA AGTCCCGCAG CTATTTGAAA GAACAGCGAG GGAAGAATGT GCCCGAATAT
TTGTATGAAC CCATCAACCG ATTCCTTGAC AAGTACCAAT CTAGCTGGGA CAAGGATATT
CGCACCAAGA CTTATACCAC CAAGCTCTTG ACGGTGGAAC AATTGACGTT GAGCACGATA
GCTGTAGTCA ACTCCGAGAA ATCAGAATTG TACGAGCTCT GGGGGGAGTC AGACATGGCA
GAATGGCAAG AGACGCTCGA TACGTTGACG AATGAATTGA TGAACCTTAC GGCGATCTGA
 
Protein sequence
MGAWGAKIFE NDGALDQLAD LTKNEQSPLE SIVQGLMEVL SSEYVDSYEG EGILVLAVFV 
IGFKSRSYLK EQRGKNVPEY LYEPINRFLD KYQSSWDKDI RTKTYTTKLL TVEQLTLSTI
AVVNSEKSEL YELWGESDMA EWQETLDTLT NELMNLTAI