Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30716 |
Symbol | NOG2 |
ID | 4838205 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 761096 |
End bp | 763185 |
Gene Length | 2090 bp |
Protein Length | 534 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389520 |
Product | nuclear/nucleolar GTP-binding protein 2 |
Protein accession | XP_001383428 |
Protein GI | 150864563 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0409155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.593065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACTC AAAAGAAGGA AAAGCAAAGA AGAGTCAGAC AAAATGACAC CAGAGACGGA AACCTCCGTG TGAAGGGTGA AAACTTTTAC AGAGATGCTA AGAAGGTAAA ACATTTGCAG ATGTACAAGT CTGGTAGAGC AGTAAGAAAT GCTCAAGGTG AGATTGTTCA AGCTGCTGCA TTGCAGAGTA CGGATGCTCC TACTGCCAGA GTTGATCCTA ACAGAAAGTG GTTTGGCAAC ACCAGGGTAA TTGCTCAGGA TGCATTGACC CATTTCAGAG AAGCTATGGG TGACAAGAAA CATGATTCGT ACCGAGTTTT GTTGAGAAGA AACAAGCTTC CCATGTCACT TTTGGATGAA AAGGACCAAA CCGAGTCACC TACTGCTAAG ATTATCGAAA CCGAGTCTTT TCTGCTGGCT TTCGGTCCCA AGCAACAACG TAAGAAGCCA AGAGTAGCTG CTTCTAGTTT AGAAGATTTG GCCCAGCTGA CGGAAACGGA AGCTACTGAA TTTCAGGAAA AGCAGGAACT CAATTCGACC TTGGGCTTAA TGGGAGGTTC TTTCCTTGAC AAAGAAGACT TTACCCAGGA GGCAAAGGAG GCCATTTTTC ACAAGGGTCA ATCCAAGAGA ATCTGGAACG AGTTATACAA AGTCATCGAC TCTTCCGATG TTGTTATTCA TGTCTTGGAT GCTAGAGATC CCTTAGGAAC AAGATGTGAA TCCGTAGAGA AATATATCAG AGATGAATGT CCACATAAGC ACTTGGTCTA TGTGTTAAAC AAGTGTGATT TAGTTCCCAC TTGGGTTGCA GTACGTGTAC TTACTAACAT TTATTTTGGT TCAGCTTTGT TTTCACTATT CTATTGTCGT TTTTTATTCA ATTCTCTCCT CTTTCTTTCT TTCTCTCCAC CAAAGCCTTT TGTCAGGGTG ATACTCTAGA CTGGTCTTCC AGTCATACCC ACAATGTTGC CTGTTACGTC TTTGGAAGAA AAATAGTTTT CGTCCGTGTT CCCAGACTTG TCTGGTTCTT CAGTCGTTTT GATTGTTGAT TTGTTCACAC TTGTCTTCCG TTTTGGTTGA CTTCTTAGAA AACTATCGGG ATCTTTTTGA GTTGAAGCTT TTCGAGGTTC GTCCTCCTTC ATGATTAGCT TCGTAGTATA GAAACCGACA TCTCATCATA AAGTTTATTT TCATTTTTCA ATTTCAATTC TTTTCAGATT TTCAATTTCA ATCTTATACA AACAAAGCTG ATTCAATCTA ATTGATTTTC ATGACATTTT TACTAACATC TTTAGGCTGC ATGGGTTAAG CACTTATCGA AGTCATATCC AACGTTGGCA TTCCATGCTT CCATCACCAA CTCTTTTGGT AAGGGTTCGT TGATTCAATT GTTGAGACAA TTTTCTACTT TGCATTCAGA CCGTAAACAG ATTTCTGTAG GTTTCATTGG TTACCCGAAT ACCGGTAAGT CGTCGATTAT CAACACTTTA CGTAAGAAGA AGGTGTGTAC TGTGGCTCCA ATTCCTGGAG AAACCAAGGT TTGGCAATAT ATCACGTTAA TGAAGAGAAT TTTCTTGATC GATTGCCCTG GTATTGTTCC ACCTTCTTCT AAGGATACCG AGTCAGACAT TCTCTTCAGG GGTGTCGTCA GAGTGGAACA CGTTTCCAAT CCTGAACAGT ATATTCCAGA CATGTTGCTG AAGTGTGAAC GTAAACATTT GGAAAGAACC TACGAAATCC ACGGCTGGAG CAAGTTTGAA GACGATGCTT CTCTTTTGGA GAATGCTAGT ACCGAGTTCA TCGAATTGAT TGCCAGAAAG CAAGGTAGAT TGCTTAAGGG TGGCGAGCCA GACGAAAGCG GTGTTGCTAA GCAAATCTTG AACGATTTCA ACAGAGGAAA AATTCCTTGG TTTGTTCCTC CACCTAAGGA TACCGAAGAA GAAAGAACCG GTACCGACAA CAAGGCTGGC TACAAGAGAA AGAGAGCTGA AAAAGAAGAA AGAGAAAACA AGAAAGCGAA GGTTGAAGAA GAAGGACAGC AACAAGAAGA AAGTCAAGCC GAAGAAGAGT GGAAGGGTAT TGAAGACTAA
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Protein sequence | MGTQKKEKQR RVRQNDTRDG NLRVKGENFY RDAKKVKHLQ MYKSGRAVRN AQGEIVQAAA LQSTDAPTAR VDPNRKWFGN TRVIAQDALT HFREAMGDKK HDSYRVLLRR NKLPMSLLDE KDQTESPTAK IIETESFSSA FGPKQQRKKP RVAASSLEDL AQSTETEATE FQEKQELNST LGLMGGSFLD KEDFTQEAKE AIFHKGQSKR IWNELYKVID SSDVVIHVLD ARDPLGTRCE SVEKYIRDEC PHKHLVYVLN KCDLVPTWVA AAWVKHLSKS YPTLAFHASI TNSFGKGSLI QLLRQFSTLH SDRKQISVGF IGYPNTGKSS IINTLRKKKV CTVAPIPGET KVWQYITLMK RIFLIDCPGI VPPSSKDTES DILFRGVVRV EHVSNPEQYI PDMLSKCERK HLERTYEIHG WSKFEDDASL LENASTEFIE LIARKQGRLL KGGEPDESGV AKQILNDFNR GKIPWFVPPP KDTEEERTGT DNKAGYKRKR AEKEERENKK AKVEEEGQQQ EESQAEEEWK GIED
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