Gene PICST_30716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30716 
SymbolNOG2 
ID4838205 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp761096 
End bp763185 
Gene Length2090 bp 
Protein Length534 aa 
Translation table12 
GC content41% 
IMG OID640389520 
Productnuclear/nucleolar GTP-binding protein 2 
Protein accessionXP_001383428 
Protein GI150864563 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0409155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.593065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACTC AAAAGAAGGA AAAGCAAAGA AGAGTCAGAC AAAATGACAC CAGAGACGGA 
AACCTCCGTG TGAAGGGTGA AAACTTTTAC AGAGATGCTA AGAAGGTAAA ACATTTGCAG
ATGTACAAGT CTGGTAGAGC AGTAAGAAAT GCTCAAGGTG AGATTGTTCA AGCTGCTGCA
TTGCAGAGTA CGGATGCTCC TACTGCCAGA GTTGATCCTA ACAGAAAGTG GTTTGGCAAC
ACCAGGGTAA TTGCTCAGGA TGCATTGACC CATTTCAGAG AAGCTATGGG TGACAAGAAA
CATGATTCGT ACCGAGTTTT GTTGAGAAGA AACAAGCTTC CCATGTCACT TTTGGATGAA
AAGGACCAAA CCGAGTCACC TACTGCTAAG ATTATCGAAA CCGAGTCTTT TCTGCTGGCT
TTCGGTCCCA AGCAACAACG TAAGAAGCCA AGAGTAGCTG CTTCTAGTTT AGAAGATTTG
GCCCAGCTGA CGGAAACGGA AGCTACTGAA TTTCAGGAAA AGCAGGAACT CAATTCGACC
TTGGGCTTAA TGGGAGGTTC TTTCCTTGAC AAAGAAGACT TTACCCAGGA GGCAAAGGAG
GCCATTTTTC ACAAGGGTCA ATCCAAGAGA ATCTGGAACG AGTTATACAA AGTCATCGAC
TCTTCCGATG TTGTTATTCA TGTCTTGGAT GCTAGAGATC CCTTAGGAAC AAGATGTGAA
TCCGTAGAGA AATATATCAG AGATGAATGT CCACATAAGC ACTTGGTCTA TGTGTTAAAC
AAGTGTGATT TAGTTCCCAC TTGGGTTGCA GTACGTGTAC TTACTAACAT TTATTTTGGT
TCAGCTTTGT TTTCACTATT CTATTGTCGT TTTTTATTCA ATTCTCTCCT CTTTCTTTCT
TTCTCTCCAC CAAAGCCTTT TGTCAGGGTG ATACTCTAGA CTGGTCTTCC AGTCATACCC
ACAATGTTGC CTGTTACGTC TTTGGAAGAA AAATAGTTTT CGTCCGTGTT CCCAGACTTG
TCTGGTTCTT CAGTCGTTTT GATTGTTGAT TTGTTCACAC TTGTCTTCCG TTTTGGTTGA
CTTCTTAGAA AACTATCGGG ATCTTTTTGA GTTGAAGCTT TTCGAGGTTC GTCCTCCTTC
ATGATTAGCT TCGTAGTATA GAAACCGACA TCTCATCATA AAGTTTATTT TCATTTTTCA
ATTTCAATTC TTTTCAGATT TTCAATTTCA ATCTTATACA AACAAAGCTG ATTCAATCTA
ATTGATTTTC ATGACATTTT TACTAACATC TTTAGGCTGC ATGGGTTAAG CACTTATCGA
AGTCATATCC AACGTTGGCA TTCCATGCTT CCATCACCAA CTCTTTTGGT AAGGGTTCGT
TGATTCAATT GTTGAGACAA TTTTCTACTT TGCATTCAGA CCGTAAACAG ATTTCTGTAG
GTTTCATTGG TTACCCGAAT ACCGGTAAGT CGTCGATTAT CAACACTTTA CGTAAGAAGA
AGGTGTGTAC TGTGGCTCCA ATTCCTGGAG AAACCAAGGT TTGGCAATAT ATCACGTTAA
TGAAGAGAAT TTTCTTGATC GATTGCCCTG GTATTGTTCC ACCTTCTTCT AAGGATACCG
AGTCAGACAT TCTCTTCAGG GGTGTCGTCA GAGTGGAACA CGTTTCCAAT CCTGAACAGT
ATATTCCAGA CATGTTGCTG AAGTGTGAAC GTAAACATTT GGAAAGAACC TACGAAATCC
ACGGCTGGAG CAAGTTTGAA GACGATGCTT CTCTTTTGGA GAATGCTAGT ACCGAGTTCA
TCGAATTGAT TGCCAGAAAG CAAGGTAGAT TGCTTAAGGG TGGCGAGCCA GACGAAAGCG
GTGTTGCTAA GCAAATCTTG AACGATTTCA ACAGAGGAAA AATTCCTTGG TTTGTTCCTC
CACCTAAGGA TACCGAAGAA GAAAGAACCG GTACCGACAA CAAGGCTGGC TACAAGAGAA
AGAGAGCTGA AAAAGAAGAA AGAGAAAACA AGAAAGCGAA GGTTGAAGAA GAAGGACAGC
AACAAGAAGA AAGTCAAGCC GAAGAAGAGT GGAAGGGTAT TGAAGACTAA
 
Protein sequence
MGTQKKEKQR RVRQNDTRDG NLRVKGENFY RDAKKVKHLQ MYKSGRAVRN AQGEIVQAAA 
LQSTDAPTAR VDPNRKWFGN TRVIAQDALT HFREAMGDKK HDSYRVLLRR NKLPMSLLDE
KDQTESPTAK IIETESFSSA FGPKQQRKKP RVAASSLEDL AQSTETEATE FQEKQELNST
LGLMGGSFLD KEDFTQEAKE AIFHKGQSKR IWNELYKVID SSDVVIHVLD ARDPLGTRCE
SVEKYIRDEC PHKHLVYVLN KCDLVPTWVA AAWVKHLSKS YPTLAFHASI TNSFGKGSLI
QLLRQFSTLH SDRKQISVGF IGYPNTGKSS IINTLRKKKV CTVAPIPGET KVWQYITLMK
RIFLIDCPGI VPPSSKDTES DILFRGVVRV EHVSNPEQYI PDMLSKCERK HLERTYEIHG
WSKFEDDASL LENASTEFIE LIARKQGRLL KGGEPDESGV AKQILNDFNR GKIPWFVPPP
KDTEEERTGT DNKAGYKRKR AEKEERENKK AKVEEEGQQQ EESQAEEEWK GIED