Gene PICST_30714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30714 
Symbol 
ID4838083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp756286 
End bp757350 
Gene Length1065 bp 
Protein Length354 aa 
Translation table12 
GC content44% 
IMG OID640389398 
Productpredicted protein 
Protein accessionXP_001383427 
Protein GI150864562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00434268 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.747519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTC ATTTTACGCG TGACTTTTTG CAGGTGATTC GTGGGCCGAT ATGTAATCTT 
GAAATGTTGA ACCTAAACAT CCTGAAACGA CATCCAAAAG ACCAACTACA GCTGGCTGGG
AATATGAGTG CGGATGGGGA CTTCGATATT GACCATCGCG ACATATTTCA GAACTTGGAT
GTTAGCCTTC TAGAGCTTTT ACATCGTCGT AGAGTGACGG AGCGTTTTCT AAACGCTTCG
CCCGACGAGA GAATCGCTAT ACTCAACGAA GAGATGGACA CTCTTGGCCA GGAAATTGAT
GATACTTTAA TAGAGAGGCA TAATCTCTAC ACTGAACAAA GAGGTCACGT CCACAACTCA
GTGTTTCGGT GGGTCTGGAT CGGTATTCCT CTTCCAGTCT TCAGATCTCG CAACTTTTAT
AGAAATTATA GTATGAGACG CATGTTGACC GTGTTGGCCG CATTTGTTAC TGCTCTATGG
CAGCGTTTCG TTCGTATGGT GCTGTTGGTT GCGTTTGGCT TTGCACTTTT CAATTATGTG
CCTAATCTAT TCCGAATGGT GCTTGTTATC GGAAACCAAA TCACATTTTC CGAAAACTTC
TTAAGAGATG CTTTGACTTA TATATTCCGT GACAACACAG CAATGATGGA ACGTCACCTT
CTCATCTTGA AGAGCAATTA CGATTTGTCC GCTGGAATTG CTGGCGACAG CTCCGTGTTT
AACACCACCT ACTCATTGGC ATACAATATT ACCTGTAGAT ACCTAATGAG TTTCTTCATT
GATTTCGGAG AGGACACCGC TGTGTATATT GACAACAAAT CGTTGGTGTT CAAGTTTGGT
GATGTAATTA ACAGCTGCTT CCCGGTGTTG ACGAGCCATC CCTGGTATGG GACCTTTGTC
ACCGTCTCGG TGTATATGTT GTACTCTGTA GTGGGAATCC TCATCTGTGT GAACATCAAC
TGGTTCTACG CAGCCAACAT TCTCAACCGT ATCCTGAGAT ACAGACGGTT TTACTTTAGC
TTGGCCAAGA TCGTGTGGAA GAGCTTGTTT TCGGAAGTCT TATAG
 
Protein sequence
MSTHFTRDFL QVIRGPICNL EMLNLNISKR HPKDQLQSAG NMSADGDFDI DHRDIFQNLD 
VSLLELLHRR RVTERFLNAS PDERIAILNE EMDTLGQEID DTLIERHNLY TEQRGHVHNS
VFRWVWIGIP LPVFRSRNFY RNYSMRRMLT VLAAFVTALW QRFVRMVSLV AFGFALFNYV
PNLFRMVLVI GNQITFSENF LRDALTYIFR DNTAMMERHL LILKSNYDLS AGIAGDSSVF
NTTYSLAYNI TCRYLMSFFI DFGEDTAVYI DNKSLVFKFG DVINSCFPVL TSHPWYGTFV
TVSVYMLYSV VGILICVNIN WFYAANILNR ISRYRRFYFS LAKIVWKSLF SEVL