Gene PICST_30705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30705 
Symbol 
ID4838158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp732064 
End bp733437 
Gene Length1374 bp 
Protein Length457 aa 
Translation table12 
GC content41% 
IMG OID640389473 
Productpredicted protein 
Protein accessionXP_001383422 
Protein GI150864559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.967273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC TTTCTTTGCA TATTGTAGCG TTCCTATCTT CGCTTTTCCA TCCTCCACCT 
TTTGAGCTCA ACCACGTGAA TAATGGGGTC TGCTTCTACG TGGAGAAACC CCAGACTCTC
AGATTGTCGT TAGATAGGCT GGAGGGTTCA CTCCCATTGA TCATATTCAA TCACAAGGAA
CTTGACCTCG TGACAAATTT GCCTGATATC TTTACATTTG CAGACGACTA CAGCCACGAC
TATAAGAACA TTAAATATGT GAAGGTATCC AACGAAAAAA CTGGGGTATC TACATTTTCG
CTAAACATTG ACAAACTCAA AAAACCGAAA TCTGTCTACT ACAACTCCCG AGCGGAGTTC
CCATTAGCAT ACAAACTTAT TGAACCCAAT GGAATATATT GCATCTACGT ACCTGTATTA
AACATGCCTT CGGGCAGGTT GCCAAACAAT TTCCGAGTCC TTGCTTCGCT CGAAACAGGG
CATGCAATGA TTCAAGAAAG CTTGTCGCAT GTAAGGTTCA ATCGTGAAAA GGTACTAATG
TTGGTTCTTT CGGTGATCCA TGTGTTTGAA TCTTTCCGCT GGAACAAGGA AAAACTCTCC
CGAGCCAAAG TCTACTACTT GACCTATTTC GTGATGAACA TTGCAATCGC TTTGTTGAGT
AGATTCCTCC TTTCGGGAAT CGGCCCTATT TATATGATTC TATTTGTGGT GGTGGGCGTT
ACTCTTGGCA GAGTATTCTT CTTCAATTTC GGATTCTTAG ATTCTAAGAA AAAGTTGCAA
TATTTTGCAC TTTGGTTGGC TGCCTATCTG CTGCTGGTTT ACGTGTTAAC ATTCCTTGAA
CCATACACAA ACACAGTGAT GGATGTTGAA GGCGTTACGT TCACCAATCT TGTAAACAAT
ATCTTGTTGA CTGGACATGA TAACCAAACT ATCAGTGAAC TTTACTATCA TGATGTTTTC
TTCCCAATAG CATATCCGGT TGGAGCTGGT CTCCTATTCG TTGCTATCTT ATTATTGTAT
TCAGAGAGGA TTCTATTGAA AAACGAGAAA AGAAAGACGG CTATAGTCTT CCAGAGGCAG
TTGGCATCAC TGGTATTGCT CTATGCTGTG TGGTTCACTA TGTTTGTAGC CATTTACTAC
TACGTGTTTT ACTTTGAGCG GATATACCCA CGCAATGTGC TGACAATATT TGAAATTTTT
GACAGCGACA ATGTAGACCA CTTTAATCGG GTCAAAGAAA TCACAATGCA CTTAGTAGCT
AACGACTTGA TGATATGGCA ACTGTCCAAA TATGCTTTGG TGAAAGGAGA TCAGCATTAT
TCTATGGACG AGGAGTCGGC TATGGCTTTC GCAGACGACA AACGATCAAC GTAG
 
Protein sequence
MKLLSLHIVA FLSSLFHPPP FELNHVNNGV CFYVEKPQTL RLSLDRSEGS LPLIIFNHKE 
LDLVTNLPDI FTFADDYSHD YKNIKYVKVS NEKTGVSTFS LNIDKLKKPK SVYYNSRAEF
PLAYKLIEPN GIYCIYVPVL NMPSGRLPNN FRVLASLETG HAMIQESLSH VRFNREKVLM
LVLSVIHVFE SFRWNKEKLS RAKVYYLTYF VMNIAIALLS RFLLSGIGPI YMILFVVVGV
TLGRVFFFNF GFLDSKKKLQ YFALWLAAYS SSVYVLTFLE PYTNTVMDVE GVTFTNLVNN
ILLTGHDNQT ISELYYHDVF FPIAYPVGAG LLFVAILLLY SERILLKNEK RKTAIVFQRQ
LASSVLLYAV WFTMFVAIYY YVFYFERIYP RNVSTIFEIF DSDNVDHFNR VKEITMHLVA
NDLMIWQSSK YALVKGDQHY SMDEESAMAF ADDKRST