Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30665 |
Symbol | |
ID | 4838142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 630277 |
End bp | 631377 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640389457 |
Product | predicted protein |
Protein accession | XP_001383754 |
Protein GI | 150864782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.522798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.228547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAACT CCGTCTTGAC GAATGATGAA GTGCTATTTA AGACTAGAGA TCCTTTAAAC AATGCCAGAG CCATAGGAGT CAAGTATGGG TATGGTGATT CTGGGTCTAA TTTCCACGAT AAGGGATTAG CAATTTTACG TAAGGATACG GTGACGGGTG AAATTTCGTT CAATCCCATT AATTATGCAC ATAAGCTTAC ACTGAAGGTG TTTCGATACA TTCGTATCAA GATTCTTAGT GAGATCGATG GAGACTTCAT GCTTACTGGA CAGTCTTTGT TTGAAAACGA TTTCAGTAGC AGCAAAGATC AAATTATCAA CGACATCGAA AAAGCCCGAT TTTTTCTCTT TGAGGAAGAT TTGTTCTACC AGTTGACACG AGAAGCAAAG ACGTTGATCA ACTACAATGT TTCAATTATC TCTAACAAGA TCATTATAGA GATCAACAAT GAAATAATCG AGATTGAGTC TGTAGTTTAT GATGAGAACA ACGATGACGA GTTGAATAAC TACTACCAGA ACATCAACGC TTACTCTTCT ATCAATAATG GCAAGTGTCA ATTGATACTA AAGTTTTTCA AGATCATGTT GTGCTGTTAC TATAAATACA ACTTGAAGTT GAAGCAAAAG ATTCCCACGT CGTTGACGAA GTGGAAACAG CTGAATTCAC ATCCATTGGT ACTACGTCCA CTTCTCGGCA ATATCAGACA CGAGTTGAAC TTGAAAAACA TGCAGAGCAT TATCGACCGA TTGATAGCCA AGTTCAAGGA AAGTCTAGAG TGTAAATTGC AGGTAGACAA GTTTGCCAAT TTGGAACACA GATCAGAAAA CCCGTTCCAG AAATCGATCG AAAGACCAGT ATCGAAGTTT AATATCGTGT TGAAGAGTAA ACGTAGCGCC TACTTGAAGA TTGACTTGGA GTTGACCACC AACGAAATCT TTGTGAATCT CATCATCAAC ATGAACGTCA TCAAGTTCAA GTGCGAAGAT GATTTTAAGA ACAACTTTAA TGGAGTTAAT GTGCTACAGA TCAACTTCAA CGATTTCCAT GAGATTGAGG AATGCTTGGA TTGGACTTTG TTGAACTTTG TCAATGGATA A
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Protein sequence | MINSVLTNDE VLFKTRDPLN NARAIGVKYG YGDSGSNFHD KGLAILRKDT VTGEISFNPI NYAHKLTSKV FRYIRIKILS EIDGDFMLTG QSLFENDFSS SKDQIINDIE KARFFLFEED LFYQLTREAK TLINYNVSII SNKIIIEINN EIIEIESVVY DENNDDELNN YYQNINAYSS INNGKCQLIL KFFKIMLCCY YKYNLKLKQK IPTSLTKWKQ SNSHPLVLRP LLGNIRHELN LKNMQSIIDR LIAKFKESLE CKLQVDKFAN LEHRSENPFQ KSIERPVSKF NIVLKSKRSA YLKIDLELTT NEIFVNLIIN MNVIKFKCED DFKNNFNGVN VLQINFNDFH EIEECLDWTL LNFVNG
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