Gene PICST_30663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30663 
Symbol 
ID4837737 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp628117 
End bp629253 
Gene Length1137 bp 
Protein Length325 aa 
Translation table12 
GC content38% 
IMG OID640389052 
Productpredicted protein 
Protein accessionXP_001383753 
Protein GI150864781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.357019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTAG CAAAGTATTC TATTTGTTGC AAACACTACA ACAAGTACGT CTACGTCCAT 
AACACTGATA TCTACAACGT ATACAATAAG ATGTTTTCAA CGTCGGTTGT TGAGCAGAAG
AAGAACGAAG CAAAACACGA TTTCTACAGC TCATTTCAGA GATTCACTCA CGTTAGCAGG
ATCCAGAAAC CCACTCAGAG TGTCAAGACT ACACAACAAA CCATAGATTC AAAAGCTCAA
ACTCAAGAGA ACCTCAATAC TCTTCAATTT TTCTGCAGAA CTGCAGAGGA AACTACATCT
GAACTTATTG CCCGTGTTGT CTATTTCTTC TCAGACATAC TCTATCAGTT ATCAGTCAAC
TCTGTGACTG CGAATTCCCT TTTCAAGTAA GTTTTACCAG AATTTCTACT ATCAACAAGG
CCAGAATGTT AACTTTATAG GTTTATCATA GAGTACATCG TTCCTTTCTT TTCTTTGGCA
AAGAGAGCAG TCTTGAACAC CTGCGAACTG GTTGAAGAGA ACTTGTGGTT GAGAGCACTA
GTAAGTATCA CCGTTTCTCA GTTAAATTCC TGATTTCACT AACATATTCT AGATTGCAAT
CTTTGTATAC TTGCCACTAA TCTTGATACT CTTACCTTTG GTTTTCTTTG CATCTGCCTT
CTTCTCTCTT TTCATGTTTG CCCTTTCTCC GTTGGTGCTC ACATTCTTGG TGTTGGCATC
TTTAGTTATG TTCTTTGCAA TAGGTGAGTA ACACAATTTT CATGGTGCAA ATCGTCTAAT
ACTAACAATT ATGCAGTTTT TGTAGTCTTT CCAATTATCT TGGTGATGAG TATCTTGGTG
ACCAGTGGTT ACCTAGTTTT CTCATTAACT GGTGGAAATC GTCAAATACA AGAGACTTTC
GAATATCGCC AGAACTGGTT GCGAAAAAAG TTGGAAATTA TTGATGAAAA TGAGGAAACC
ACAAATGATG GATATCATGT GGTCAGTGCC TCACAAGAAA CGGTACAAAA CATAGGTCAA
AGTTTGGATC AAATCCCACA GGAAAAACTA GCGGTTGTGT CGGATAATGA TGATCCTGGT
ACATTTCTGG TGGTTGTGGC TCTGGCTACT GTTACAGAAT CTACTGAGAG ATCATAG
 
Protein sequence
MTVAKYSICC KHYNKYVYVH NTDIYNVYNK MFSTSVVEQK KNEAKHDFYS SFQRFTHVSR 
IQKPTQSVKT TQQTIDSKAQ TQENLNTLQF FCRTAEETTS ELIARVVYFF SDILYQLSVN
SVTANSLFKF IIEYIVPFFS LAKRAVLNTC ESVEENLWLR ALIAIFVYLP LILILLPLVF
FASAFFSLFM FALSPLVLTF LVLASLVMFF AIVFVVFPII LVMSILVTSG YLVFSLTGGN
RQIQETFEYR QNWLRKKLEI IDENEETTND GYHVVSASQE TVQNIGQSLD QIPQEKLAVV
SDNDDPGTFS VVVASATVTE STERS