| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30659 |
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| Symbol | |
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| ID | 4838136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 620139 |
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| End bp | 623759 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640389451 |
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| Product | predicted protein |
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| Protein accession | XP_001383751 |
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| Protein GI | 150864780 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.498733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTC AAAGCGACCG TGAGTTGCAA ATTGGATCAA AAGATCCAGA AGATTCGACT
CGACGAGTCT CGTTACCCCC AGCATCTTAT GACGAAACCA CAAAGACTTT ATCCATACTG
CTCTTCCAAA AGATCAAACC GATTTCTATA GAGCTCTCAA ATATAGGATT GCTAGATACA
CCAGCTTTTA ATAGCCAATT CCGTCGATTG GCCGAGGTGT TGGAATCAGA ACATGAAGTT
CTAGACAGTC ATTATAAAGA AAATACTAAG AGTTCCCAAA ATTTAATACC TTATCATCTT
TCGCCAAACT TGGCTGATTA CATATTTTTC CCATTATCGA ATATCCTCAA GCAGCCAGCA
ATTGATGATC GTATTACTAC ATCAATTTTA AAAATAATAG GCTTTCTAGT CGAACATATA
TGGAGCTACA AGTTCGACGA GAAGTTTGTG GATGAATTGC TATCTATTGT GTTGTTCCTT
TCTGGTGCCA ATTCTAGCCC TTCTAGTGGA TCGAAACCAA TTGAGTTTAG AGCAGCAGCT
GTAGATTGCC TTGCTATGAT ATTGAAATCC GTACCAAACG ACTACTTTGT TGAAACAGCT
AATGTCAAGA GAATGTCATT GTTAGGCAAT TCAATTAGCT TCTTCTTGGA TAACATCACT
TGGGCCACAA ATCCAAGGTC TCAGGAAGAA AACAACTTGC TTATAAATAA TCTTGATATT
CTTGTTAATA CGGCTACCTT TAAGATGTCT TCAGACCAAT TGGCCCATGT TCTTCCTGGG
ATGGTGTCGA ACTTGACTAA CTTCTTTACC CAGTCTAAGA ATTTGCACTA TACCGTGATA
GTAAAAGTGG TAGAAGCCTT GAAAGTGATC ATAATCAAAG TGTTCAACGA CAAGACCCTT
AATGTTCTGT ACAAGGATGT TCGACAAATA GACAATTTGG AAGCAGTAAA TGAACTATGG
AGCCAAGAAA CCGATGAAGA TGTTCCTACT AACAGGATAA AGATCGAGAT ACCCTCCAAA
ACAGGAATTA GAAACACAGC ATGGCTCCAA GCAACTTCAA AACAACTCAA ACTTTCACTA
ATTGTTTTTT TCAAGACTCT CTTGGTGACC TCTAGCAACA ATAAGCTGAA AGTGCAAACC
AAGAACTTGT TAGCAGAGGC GATCTACAAA TTCTCTGATG CTATAATGGA AAACTCATTT
TTGTCTCTTT TCAATGAAGT CGTGCCACTT TCTCTCGATA TGCTTGCTAC AACAATATCT
CTTGTCGCGA CGAATGTTGA AGAAGAGAAT ACCAGCATAG CCAATGTTGT GAAACAAGTG
GGTATTTTGA TTTCAGCTAA TAGAGAAAAC TGTTCACTTT TTTTCAATCA GATCAAGTCT
AAGTTAGATG ACTTGATTAC GAACAAACTT ACTTCCGTGA TTCTCTCTGT TGATGATGAG
AAGATCAACT CATATTTAGT TTGTATCAAG CTTCATTTGC TGCTTTTGAA TAATCTTTCA
AAATCTGCTT ATAATGTTCA TGAAGCTGTA CTGAGTAACA AGAAGAATAT TATGGTTCTT
CTCAGCAAGA GTTTGAAAGA AAGTTATATT CAGAATAGTC AACAAAAAGA CAACACTAAC
GATCTCTTGA AGATGCTCAG TGGAAGTCAA ACAGAGGAAG GATTTTCTAA CAAACTAGAT
AACGTAGAAT TACCTCCAAA CATCGATTCC AAAAAGATTA CAAAAATACG ACCGGATCAA
AATAGAGAAA ATGTTTCCGA GCTGTACTCA TCCAATTTGA TGCTTTTGTC AAACAAATGG
AGTGAAGATT CTGTGACAAG AAGCGAACCT CAATACTACT TCTCTACTCT ATATTCCAAC
ACAATCGAAG AAAAGTTTGC TGGGCTTATT CAATTTATAG CTGCTCTAGC AGATGATGAT
GAAAATGAAC AGACAGGACA GTTAGAATTG GTGGAGTCTC TTTTTGATGA GGAGAGCGAA
AAGAACACTT TGGACAGAGG AATCGCATTA TGGGTAGCCA ACAACTTTTT CATTAACCAG
AAGTCGTCGA GGAATAAGAT CAATATGAAC GATTATATTA TTCTTGAAAA TGACTCCGAT
GAAGAAGATG AGTTGGAAGA AATGTCGTAT CTATTGGTCA GCAAGTCTCA AGACTTGATT
AATGATACCT CTTTTGAACT TGCCAATGCT GGAATTTCTG GGAACAGTTT GAAAGTTAAC
GAAATGTCGT ACTCGATAGC CTTAGATACC ATTGGAATTC TTTCAAGCAA ATTACCTTTG
GAAGAGTTTA GATCGAACTT CCTCAGAGAC TTCTTGTATT CTCTACTAGA GGCATTGACA
TTTCGATCAA ACACACTCAT TCAATCGCAT GCTCAGACAG CTGTCGGGTT TATTCTCAAG
AATTACTATA ACGACTCGTT AGAGTCGTTG ATACTTGATA ACCTGGACTA CTTGATAGAT
AACATCAGCT TAAGACTAAC TGTTCCAAGC AATTTTGTAC CAACTCTTCC CGGTATCTTA
TTGATCATTA TAAAAGTAGC TGGTCAGAGC CTCCTTGAGA TGAACCAACT CAATGACGTC
TTGTCAGAGA TGTTTGTAAT TATCGATTCG TACCACGGAT ACTCGATTAT TGTAGAAGGT
TTGTTTATGG TTTTTGAAGA AGTCACCAAG CAAGTGAAAG AAAGATACCT CTCACAAAAC
AGTCTTCAAA TAGAATTAGA TCCCGACCTC AATACTTCAA GCTATAAACC ATGGGGATTG
ACTAGTGTTA AGCAGGTGTT GAAATTATTG AGCGATTCAG CCAAATTGAC TGAACCATTT
GAGTCATATG ATTCGACAAA GGAATACTTC AAAAGAAAAC CAGATACTCC TTTTTCAGAG
CAAGCTGCAG ATTCTGACGA TGATGATGAC GATGAACAAG AACCTGACGT TGCAGAAGAA
GAAAAATGGC CATCACCTGT TCCTGAAAAT ACCTACTTTC TTGTGCAAAG GATATTCAAT
TACGGATTTG TAGTGTTGTC TCAGAAATCA ACCAGCATGA AGTTGCAGGT GTTGAAGACT
TTGAAACAGA CTTATCCGAT TTTGACTACC AACTACAAGT TGGTGTTGGT GATCTTAACT
AAGAACTGGC CCATTCTCTT GACGTTGATC AGTGGGTCCA GCAGCTTGTC TGTCTTCCAA
GATGTTCATG AAGGTGTCCT ACCAGAACTG GAAGCTCTAA TTGTTCCAGC TTTGGAGTTT
GTTATAGAGA TCGTGAAGGA AGATGGTGAT AGAGAGAATT TCCTAGGAAA TAAATTCATA
GAGTCCTGGG AGTTTCTCAT CAACCATTCG CCCATTTTCG GCCGTCTTCG CAAGAGAGAT
AGTTTCAGCT TGAACAGTAA GCTGAAACAG ATAAGTAGGA TCGAACAACA ATTAACTACG
ACGCGGTTGA ATCCAAAAGT CAATGATCTT CTTGTGACTT ACTTAATCAC AGGCCTCAAC
TGCTATGAGA GGACAGTATC TGACTTGGTG CGTTTGGATA TTGTTAGAGT GTGTTATAGA
ATGGGCATAC CATCCGACAT GAAGTTGAGC AGAGACGTCA GGAATACGTT GTGGATAGTG
AAGAACGAGG ACGACAACTA G
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| Protein sequence | MSVQSDRELQ IGSKDPEDST RRVSLPPASY DETTKTLSIS LFQKIKPISI ELSNIGLLDT
PAFNSQFRRL AEVLESEHEV LDSHYKENTK SSQNLIPYHL SPNLADYIFF PLSNILKQPA
IDDRITTSIL KIIGFLVEHI WSYKFDEKFV DELLSIVLFL SGANSSPSSG SKPIEFRAAA
VDCLAMILKS VPNDYFVETA NVKRMSLLGN SISFFLDNIT WATNPRSQEE NNLLINNLDI
LVNTATFKMS SDQLAHVLPG MVSNLTNFFT QSKNLHYTVI VKVVEALKVI IIKVFNDKTL
NVSYKDVRQI DNLEAVNELW SQETDEDVPT NRIKIEIPSK TGIRNTAWLQ ATSKQLKLSL
IVFFKTLLVT SSNNKSKVQT KNLLAEAIYK FSDAIMENSF LSLFNEVVPL SLDMLATTIS
LVATNVEEEN TSIANVVKQV GILISANREN CSLFFNQIKS KLDDLITNKL TSVILSVDDE
KINSYLVCIK LHLSLLNNLS KSAYNVHEAV SSNKKNIMVL LSKSLKESYI QNSQQKDNTN
DLLKMLSGSQ TEEGFSNKLD NVELPPNIDS KKITKIRPDQ NRENVSESYS SNLMLLSNKW
SEDSVTRSEP QYYFSTLYSN TIEEKFAGLI QFIAALADDD ENEQTGQLEL VESLFDEESE
KNTLDRGIAL WVANNFFINQ KSSRNKINMN DYIILENDSD EEDELEEMSY LLVSKSQDLI
NDTSFELANA GISGNSLKVN EMSYSIALDT IGILSSKLPL EEFRSNFLRD FLYSLLEALT
FRSNTLIQSH AQTAVGFILK NYYNDSLESL ILDNSDYLID NISLRLTVPS NFVPTLPGIL
LIIIKVAGQS LLEMNQLNDV LSEMFVIIDS YHGYSIIVEG LFMVFEEVTK QVKERYLSQN
SLQIELDPDL NTSSYKPWGL TSVKQVLKLL SDSAKLTEPF ESYDSTKEYF KRKPDTPFSE
QAADSDDDDD DEQEPDVAEE EKWPSPVPEN TYFLVQRIFN YGFVVLSQKS TSMKLQVLKT
LKQTYPILTT NYKLVLVILT KNWPILLTLI SGSSSLSVFQ DVHEGVLPES EALIVPALEF
VIEIVKEDGD RENFLGNKFI ESWEFLINHS PIFGRLRKRD SFSLNSKSKQ ISRIEQQLTT
TRLNPKVNDL LVTYLITGLN CYERTVSDLV RLDIVRVCYR MGIPSDMKLS RDVRNTLWIV
KNEDDN
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