Gene PICST_30641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30641 
Symbol 
ID4837919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp575254 
End bp575745 
Gene Length492 bp 
Protein Length163 aa 
Translation table12 
GC content46% 
IMG OID640389234 
Productpredicted protein 
Protein accessionXP_001383391 
Protein GI150864538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.35993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.660884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCA AGAAAACGAG AGAAGAGATT ATGGCTGACT TCGAGAACGA GCAGCTTCGT 
ATCGAAGCCA TGGAGCTCCA CATCGACGGC CATGACGACA AGCCTCTTGT TTATCACCGC
GAGATGGAAG ACATGCCCCA GAGACTTCAC TTTATTCTTC CTGAAAACTG TGTCTACAGT
GTTACTATAA AGTACAAGGT CAAGAAACAG CCTTTGAGAA ATCTCACCTA CAAGCAGATG
GTGAAGAAGG CTGGAATCGT TGTCAACCTG AGGAAACTCC ATATGGGAGA CGAAGCACAT
GTCAACATTG ACCAAGACGA CCATACTCAC GAGGTTACGT TCCCTCCTGA CAATGTTCCT
GGAGGTACTT TCTTCAGAGG TAAGCACCCG GCTGTGAGCA CAGTATATGC TGACGGAAAA
GAAGTGTGGA AGACTAAATG GTACATTGAG ATTGTTAAGG AAGGAAGTCT TCCCGAGATC
GGTGGGTACT AA
 
Protein sequence
MTVKKTREEI MADFENEQLR IEAMELHIDG HDDKPLVYHR EMEDMPQRLH FILPENCVYS 
VTIKYKVKKQ PLRNLTYKQM VKKAGIVVNS RKLHMGDEAH VNIDQDDHTH EVTFPPDNVP
GGTFFRGKHP AVSTVYADGK EVWKTKWYIE IVKEGSLPEI GGY