Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30616 |
Symbol | |
ID | 4838145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 516492 |
End bp | 517220 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389460 |
Product | predicted protein |
Protein accession | XP_001383734 |
Protein GI | 150864765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0141932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.411701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTA TCGACTTCGA CGCTACTTTA GATGAGCTTG ACATCCGATT CTTGGACCCT ACCAATGACT TAATATCAGG CAACTCTGTG GAAACACTGG CTGTTTTCGA CGACAAACAA TTTCTATTCG CTAGCTTGGC GACTCCATTC AGCTGTCAAC CATTCAAATT CCTCGAGAGT GACGGCGATG GTAGCATTTC TCCCACAAAA CTCGTCAACC CCCGAATGAG AAACTCTTTC AGTAAGCAAC TGGCTTTGGC ATCTCCCTTA TTGGACAACA CCGAATTTAG TTTCGGGGAT ATTTCACCAA CACAAATAGT AAATGGAAAA GGCGATGATC TCGACCATTC AATTCTAGAC GACAATGAAG TTGACGAAGA AGATGAGTTG ATCTCACCGC ATTCGCTAGT TAAGCCCAAG AAGAAATCAT CCATCACAAA ATATAAGATC AACAAATCGT TCACAACTTC TCCCACAATG AAGGCGCCAT TGAAGCCTAC GGTGACAATT GCTTCTATAG ACACATATTC TCAACTTCAG AAGAAAAATG CCATTGAAGG TCATAAGCGG CGAGCTTCCC GGGAATTGCG AGCCAATTCT ACCCCTAGTA TATTCGGAAC CGATGCCAAC CGAAAACTAT ACCCTGTTCT GGTGGGCAAT CCATTCTATC GCCCTATCAA GTTCAGATCC AGCACCTCCA TTCCCACGTT AGAAAGAAAG GAATGGTAG
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Protein sequence | MNIIDFDATL DELDIRFLDP TNDLISGNSV ETSAVFDDKQ FLFASLATPF SCQPFKFLES DGDGSISPTK LVNPRMRNSF SKQSALASPL LDNTEFSFGD ISPTQIVNGK GDDLDHSILD DNEVDEEDEL ISPHSLVKPK KKSSITKYKI NKSFTTSPTM KAPLKPTVTI ASIDTYSQLQ KKNAIEGHKR RASRELRANS TPSIFGTDAN RKLYPVSVGN PFYRPIKFRS STSIPTLERK EW
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